Ricinus communis (castor bean): 8270640
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Entry
8270640 CDS
T01087
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
8270640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8270640
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
8270640
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DUF1464
Motif
Other DBs
NCBI-GeneID:
8270640
NCBI-ProteinID:
XP_002511723
UniProt:
B9RDD3
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Position
1:complement(1159502..1165286)
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AA seq
684 aa
AA seq
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MARNREGLILLLDVGPSMHNVLPEIERICSMLIQKKLIYSKSDEVGIVVFGTEETVNELT
VEVGGYEHVLVLQNMKVVDGDLVEALHHLPRGTVAGDYLDAIVVGMDMMIKKYQLTNKGK
KRLCLITDAGNPIKEPYEGTKEDQVSTIALQMAAHGVRMETIVVRGRPSQDIDQRIVDEN
DHLLHLFSEKTSAKTVYVESPTSLLGALRTRNISPVTIFRGDLEISPKLKIKVWVYKKTS
EEKFPTLKKRSDKAPPTDKYATHEVKVDYEYKSVEDPNKVVPPDQRIKGYRYGPQVIPIS
SAELDAVKFKPEKSVKLLGFTDAANILRHYYMKDVNIFIAEPGNMRATIAVSALARAMKE
MDKVAIVRCVWRQGQGSVVVGVLTPNLSEKDKTPDSFYFNVLPFAEDVREFQFPSFSNFP
ASWQPSEQQQEAADNLVMMLDLATPGKEEVLLPDFTPNPILERFYHHLELKSKHPDAAVP
PLDRTLKKITEPDPELLSGNKSVIDAFCRSFEVKENPKRKKSTRRFLREKPSGSDDDRDY
GDSSIALAIKSGDVEKIGDSNPVQDFEAMLSRRDNPDWVGKAIKDMKNKIYSIVENCYEG
NNYPRALECLAALRKGCILEQEPKQFNDFLHDLFRFCQGKKLGSFCEFLASKELTLISKS
EAIDSEVTDDEARSFFVKKEPKIE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaatcgggaaggattgatattgttactcgatgttggtccatcaatgcacaat
gttcttcctgagattgaaagaatctgttctatgctcatacaaaaaaagctgatttacagc
aaatctgatgaagttggaattgtcgtgttcggaactgaagaaactgtcaatgagctgacg
gtggaagtgggtggatatgagcatgttctggttttacagaatatgaaggttgttgatgga
gatcttgttgaagcgttacaccatcttccgcgaggaactgttgctggtgattatcttgat
gcgattgttgttggtatggatatgatgataaaaaagtatcaactgacaaacaaaggaaaa
aagcgtctgtgtcttataacagatgcaggaaatcctattaaagaaccatatgaaggaacc
aaagaagatcaagtgagcactatagctctacaaatggctgcacatggagttagaatggaa
actattgttgtcaggggcagaccaagccaggatatagatcagagaatagtggatgagaat
gaccatctgttgcatctattttcggagaaaacatctgctaaaactgtatacgttgaaagt
ccaacttcattgctaggtgcacttagaactcgaaacatttctccagtcacaattttcagg
ggcgatcttgaaatcagtcccaaattgaagattaaggtatgggtctataaaaaaacctca
gaggagaagtttcccactctcaagaaacgttctgataaagcacctccaactgataaatat
gccacacacgaggtcaaagtggattatgagtacaaaagtgttgaagatcctaataaggtt
gtaccaccagatcaaagaatcaaaggttatcgatatggaccccaagtgattcctatttca
tctgctgagttggatgctgtcaagtttaaaccggaaaagagtgtgaagcttcttggtttt
actgatgctgcaaacatattgcgacactattatatgaaagatgtcaacatcttcattgct
gaaccgggtaatatgagggctacaattgctgtttctgccttagcaagagcaatgaaggag
atggataaggttgcaattgtgcgatgcgtttggagacaaggccaggggagtgttgttgtg
ggtgttttgacacccaacctatctgagaaagacaagactcctgattcgttttacttcaat
gtgcttccttttgctgaggatgtccgagaatttcagtttccttctttcagcaattttcct
gcctcatggcagccgagtgaacaacagcaagaggcagcagataaccttgtaatgatgctc
gaccttgcaacacctggcaaagaggaagttcttctgcctgacttcaccccaaatcctatt
ctggagcgtttctatcatcaccttgagttaaaatcaaagcacccagatgcagctgtacct
ccactagacagaactctcaagaaaataacagaacctgatccagagcttctttcgggaaac
aaatctgtcattgatgcattttgtagaagctttgaggtcaaggagaatccaaagcgaaaa
aaatcaaccaggcgatttttgcgagagaagccatctggctcagatgatgatagggattat
ggagattcatctattgctctagctatcaagtctggcgacgttgagaaaattggggattca
aatcctgtccaggattttgaagccatgttgtcgcgtagagataacccagattgggttggt
aaagctattaaggatatgaagaataagatatacagcattgtggagaattgctatgaaggg
aataattatcctagagcactggaatgtttggctgcccttcgcaaaggctgcattctagag
caagaaccaaaacagttcaatgatttccttcacgatcttttcagattctgccaggggaaa
aagcttggcagtttctgtgaatttcttgcatcaaaggagctcacattgatttccaagtct
gaagccatagacagtgaggttacggatgatgaagctagaagctttttcgttaaaaaggag
ccaaaaatcgagtga
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