KEGG   Ricinus communis (castor bean): 8270717
Entry
8270717           CDS       T01087                                 
Name
(RefSeq) uncharacterized protein LOC8270717
  KO
K03873  elongin-B
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8270717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcu04121]
    8270717
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8270717
Ubiquitin system [BR:rcu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     8270717
   Cul5 complex
     8270717
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     8270717
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Ubiquitin_2 DUF3969 UBL_UBAC1
Other DBs
NCBI-GeneID: 8270717
NCBI-ProteinID: XP_002533234
UniProt: B9T4R5
LinkDB
Position
3:23667609..23670366
AA seq 107 aa
MATEPAMYIRVKRNKTTYFIQCGPAEKILDVKQKLHVLIDKPVSDQRLTLMPNGEVLEDS
KSLADHNVENDAVVALTLRKDDNEFEDINIVRPNDFYQNRDADGGNW
NT seq 324 nt   +upstreamnt  +downstreamnt
atggcgactgaacctgctatgtatatccgggttaagcgtaacaagacaacttactttatc
caatgcggtccagctgagaaaattctggatgttaagcagaaattgcatgtcctgattgac
aagccagttagtgatcagcgactgaccttaatgccgaatggggaagtgttggaggattcg
aagtcattggcagaccataatgttgaaaatgatgctgttgttgcattaaccttgagaaaa
gatgataatgagttcgaggatatcaatattgtccggccaaatgatttctaccagaatcgt
gatgcagatgggggcaattggtga

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