Ricinus communis (castor bean): 8270882
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Entry
8270882 CDS
T01087
Name
(RefSeq) beta-galactosidase isoform X1
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00052
Galactose metabolism
rcu00511
Other glycan degradation
rcu00600
Sphingolipid metabolism
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
8270882
09103 Lipid metabolism
00600 Sphingolipid metabolism
8270882
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
8270882
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
8270882
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Glyco_hydro_72
Motif
Other DBs
NCBI-GeneID:
8270882
NCBI-ProteinID:
XP_002513059
UniProt:
B9RGA7
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All DBs
Position
8:complement(13543433..13552068)
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AA seq
1110 aa
AA seq
DB search
MASLAANMVSPLETGHKVWEDPSFIKWRKREPHVTLHCHESVEGSLRYWYQRNKVDVLVS
KSAVWNDDAVKAALDCAAFWVKDLPFVKSMSGFWKFFLAPSPTKVPIKFYEPAFQDFEWQ
TLPVPSNWQMHGFDRPIYTNVVYPFPLDPPYVPEDNPTGCYRTYFQIPKEWQGRRILLHF
EAVDSAFCAWVNGVPVGYSQDSRLPAEFEITEYCYSCDSGKSNVLAVQVIRWSDGSYLED
QDHWWLSGIHRDVLLLAKPQVFIVDYFFKSNLAEDFASAEIEVEVKLDSSQEMPKDKILD
NFVIEAALYDTESWYNSDGAANLLSSQVADIKINPSFDAILGFLGYVLVGKVEKPKLWSA
EQPNLYILVLTLKDAFGHVVDCESCLVGIRQVSKAPKQLLVNGQPVIIRGVNRHEHHPRI
GKTNIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFHLS
GHIKHPTSEQSWAIAMIDRVIGMVERDKNHACIISWSLGNEASYGPNHSAAAGWIRGKDT
SRLVHYEGGGSRTPSTDIVCPMYMRVWDIVKIANDPTELRPLILCEYSHAMGNSSGNICE
YWEAIDSTFGLQGGFIWDWVDQGLLKENTDGSKYWAYGGDFGDTPNDLNFCLNGLTWPDR
SPHPALHEVKYVYQPIKVSLKGSTLKITNTYFFETTQGLEFSWAAHGDGHQLGSGILSLP
LMKPQSSYDIELESGPWYPLWASYSGEIFLTVTAKLLHSTPWVETGHVISSTQVQLPSRK
EIIPHVIKATDATLSSEILGDTVRVSQQTFWEITLNIQTGTVESWKVEGVTIMNKGILPC
FWRAPTDNDKGGEENSYYSRWKAARIDNLEFLTKSCSIQEKTDHLVKIKAVYIGVPRDED
DSSQSSKQALFEVDIIYEIFGSGDLIIECNVSPSSDLPPLPRVGVEFHLVESVDHVRWYG
KGPFECYPDRKAASHVGIYEKNVCDMHVPYIVPGECSGRADVRWVTFQNKEGKGIFASMH
GNSPPMQMSVSYYSTRELHRARHNKELVRGNDIEVHLDHKHMGIGGDDSWSPCVHEKYLV
PAVPYSFSIRLCPITAATSGLRIYEPEHQN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttagccgcaaacatggtctctccattagaaactggacataaagtttgggag
gatccatcttttattaaatggagaaaaagagaacctcatgtcactttacactgtcatgag
tctgttgaaggatctcttagatactggtatcagcgcaataaagtggatgtgttggtatcc
aagtctgctgtttggaatgatgatgctgttaaagcagctcttgactgtgctgctttttgg
gttaaggacttgccttttgtcaagtctatgtctggcttttggaaattcttcttggctccc
agtcctaccaaagttcctataaaattttatgagcccgcatttcaggacttcgagtggcaa
actttaccggttccttcaaattggcagatgcatggatttgatcggcccatttatacaaat
gtggtttatccatttccacttgatcctccatatgttcctgaggataatcctactggctgc
tatagaacatacttccagattcctaaagaatggcagggtcgccggattttgttgcacttt
gaagctgttgattctgcattctgtgcttgggtaaatggggtccctgtggggtatagtcag
gacagtaggctacctgctgagtttgaaataacagaatactgttactcgtgcgattctgga
aaaagcaatgttctggctgttcaagttattagatggagtgatgggtcttaccttgaagat
caagatcattggtggttatctggcatccaccgtgatgtgcttcttcttgccaagccacag
gtatttattgtggactactttttcaaatcaaacctagccgaggattttgcttctgcagaa
atagaggttgaagtcaaattagatagctctcaagaaatgcctaaagacaagattcttgat
aactttgtcatagaagctgcgttatatgatactgagagctggtataacagtgatggagct
gctaatctactttcatcacaagtggctgacataaagattaatccgtccttcgatgcaatt
ctaggatttcttgggtatgtgctggtgggcaaagtagaaaagccaaagctttggtctgca
gagcaaccaaacctgtatattcttgttctcaccctcaaagatgcttttggccatgtggtt
gactgtgagtcatgcctagtaggcatcagacaagtatccaaggcacctaaacagctgctt
gttaatggtcagccagttataataagaggcgtgaacagacatgaacatcatccccgtatt
gggaagacaaacattgaatcctgcatgattaaggatctggttctgatgaagcaaaacaac
atcaatgctgtgagaaacagtcattaccctcagcatcctcgttggtatgagttatgtgat
ctttttggcatgtacatgattgatgaagccaacatcgagacacatggttttcatctgtct
ggacatataaagcatcctacttcagaacagagttgggctatagcaatgattgatcgtgtg
atagggatggtggaaagagacaaaaatcatgcatgcattatttcttggtccttaggaaat
gaggcctcatatggacctaatcattctgctgcagctggttggattcgtggaaaggatacc
tctcgattagtgcactatgaaggaggtggatccagaactccatctacggacatcgtatgc
cccatgtatatgcgtgtttgggacatagtgaagattgcaaatgatccaacagaattacgc
cctttgatattgtgcgagtattcacatgcaatgggaaacagcagtgggaatatatgtgaa
tattgggaagcaattgacagcacatttggtctccaaggaggcttcatttgggactgggtt
gatcaggggctgttgaaggaaaatacagatggtagtaaatattgggcatatggaggtgac
tttggggatacccctaatgatttgaacttctgtctgaatggtcttacatggccagatcga
agtccgcatcctgcattacatgaggtcaagtatgtatatcaaccgataaaggtctcgctc
aaaggaagcacacttaagataaccaacacttactttttcgaaacaacacaaggattggag
tttagttgggctgcccatggtgatggacatcaacttggctctggaattctatctcttcca
ttgatgaaaccccaaagtagttatgatatagaattggagtcaggtccatggtatcctcta
tgggcttcatattcaggagagatctttttaacagtcacagctaaacttttgcattcaaca
ccatgggttgaaactggtcatgttatttcttctactcaagtgcagttgccttcaagaaaa
gagatcataccacatgtaatcaaagctacagatgctacactgtctagtgaaattctaggg
gatacagttagagtcagccagcagacattttgggaaataacattgaacattcaaacggga
accgttgaaagctggaaggttgaaggagttaccattatgaataaaggcatactcccatgc
ttctggcgagcacctacagataatgataaagggggagaggaaaatagttattactctaga
tggaaagcagctcgcattgataaccttgaatttctcacaaaaagctgttccatacaggag
aaaaccgatcatcttgtgaaaataaaggcagtatatattggtgttccaagagatgaggat
gattcctctcaatctagcaagcaagctttgtttgaagtagatataatttatgagattttt
ggctctggggacttgattattgagtgcaatgtaagtccaagttctgatcttccgcctttg
cctcgtgttggagttgagtttcacttggtagaatctgtggaccatgttagatggtatgga
aaagggccatttgaatgttatccagataggaaagctgcatcccatgttgggatctatgag
aagaatgtatgtgacatgcatgttccttatattgttcctggggaatgctctggtagggca
gatgttagatgggtgacatttcagaacaaagaaggaaaaggaatttttgcgtcaatgcat
ggcaattctccacctatgcaaatgagtgttagttactattctacgagggaacttcaccgg
gcaagacacaataaagaacttgttcgaggaaatgacattgaggttcatcttgatcacaaa
catatgggtataggtggagatgatagctggtcaccctgtgtccacgaaaaatatctggtt
cctgctgtgccatactccttttctatcaggttatgtccaataacagcagcaacctctggc
ctgcggatctacgaacccgaacatcaaaactag
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