Ricinus communis (castor bean): 8271422
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Entry
8271422 CDS
T01087
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
8271422
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcu01007
]
8271422
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8271422
Enzymes [BR:
rcu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
8271422
Amino acid related enzymes [BR:
rcu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
8271422
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
8271422
Prokaryotic type
8271422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
8271422
NCBI-ProteinID:
XP_002509487
UniProt:
B9RBF3
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Position
5:23260746..23269829
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AA seq
492 aa
AA seq
DB search
MAEEAILGYLENNEEISDSGQFAAEKGLDHTEIVNVLKSLFGFRFVDVQDIKRETWVLTD
EGRKYADEGSPEVQLFLAVPPEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQISR
KVQNVEDKVKHLLLQIRDGKEIDKDGINSLKARKLIVLQTWKGYSVRKGPNYAPKRKKPA
TDLTRENLQRGDWKELEFKEYNFNAKGPPAECGHLHPLNKVKDRLKDIFRQLNFEEMPTN
RYVESSFWNFDALFQPQQHPARDSHDTFFLQVPSTTKQLPEDYVERVKQVHESGGYGSRG
YGYDWKRDEANKNLLRTHTTAISSRMLYALAQHAKEQTFTPKRYFSIDRVFRNEAVDRTH
LAEFHQIEGLVCDRGLTLSHLIGILEDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGF
GKWVEIGNSGMFRPEMLQPMGFPEDVSVIAWGLSLERPTMILYGIDNIRDLFGHKVDLSL
MKKNPLCLIGIR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcgatattggggtatttagaaaacaacgaagaaatctcagattcaggc
caattcgcagctgaaaaagggttagaccacactgagattgtcaatgtcctcaaaagcctt
ttcggttttcgcttcgtcgacgtccaggatatcaagagagagacatgggtgcttactgac
gaaggtagaaagtatgctgacgaaggatcacctgaagttcagctgttcttggctgtgcca
cctgagggtagcatctcaaaggatgagttgcagaaaaagcttgaccctgcagttttcaaa
atagggtgctcacaggctggaaaaaataaatgggtggaaatgggaaagcaaatatcgagg
aaggttcaaaatgtcgaagacaaagtaaagcacctgcttttgcagattcgagatgggaag
gaaattgacaaagatggtatcaactctctgaaagcaagaaagcttatagttctacagaca
tggaaaggctactcggtgagaaaaggtcctaattatgcaccaaagagaaagaaaccagcg
actgatttgactcgagagaatctacagaggggcgattggaaggaactagagtttaaggag
tataacttcaatgctaagggtccaccagctgaatgtggccatcttcatccactcaacaag
gtaaaagaccgactgaaggacatatttcgtcaactaaactttgaggaaatgcctacaaat
agatatgttgaaagcagcttctggaattttgatgcactattccagccacagcagcatcct
gcccgtgattcacatgatacattttttttacaagttccttcaactacaaagcaactgcca
gaagattatgttgagcgagtgaagcaggttcatgagtccggaggatatgggtcaagagga
tatgggtatgattggaaaagagatgaagcaaacaaaaatcttttgcgaactcacacaaca
gcaatttcctctcggatgctttatgcactagcgcagcatgcaaaagagcaaacttttacc
ccaaaaagatacttctcgattgatcgtgttttcagaaatgaagcagtagatcgtactcat
ctagcggagttccatcagatagaaggcttggtgtgcgatcgagggcttactttgagtcac
ttgattgggatcctggaagacttcttttcacgactgggcatgtcaaagctgcgctttaag
cctgcttacaatccgtacacggaacctagcatggagatttttagctatcatgaaggcttc
gggaaatgggtggagattggaaattctggcatgttcaggcctgaaatgttgcaaccgatg
ggattcccagaagatgttagcgttattgcttggggcctttcactggagagaccaacgatg
atattatatggaattgataatatccgagatctgtttggacacaaggtggatcttagtcta
atgaagaaaaaccctctgtgcctcatcgggattcggtag
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