Ricinus communis (castor bean): 8271541
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Entry
8271541 CDS
T01087
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00906
Carotenoid biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
8271541
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8271541
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
8271541
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
8271541
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
8271541
NCBI-ProteinID:
XP_048234856
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All DBs
Position
9:23900574..23903818
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AA seq
382 aa
AA seq
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MIMFSTLSVAPKPYGLNPNNRNLLHPPFISATTERTRALIMSAPNRQSRISILPRIDLHM
HEVIAKQSQAVSLLPHQNAHRKPDFPPLFLEEAYKRCKKICAQNAKTFYLGTLLMTEEQQ
KAIWAIYVWSRRTDELVDGPNAEHMSSAVLDLWEQRLESIFDGNPHDILDAALTDTVFKF
ALHIEPFKDMIEGMRMDTRKFRYENFEELYLYCYYVAGTVSLMTVPVLGIAPDSCVSAQT
IYYGALYMAIANQLTNILRDVGEDGLRGRIYLPQDELAQFGLCHEDIFTRKVTDKWKEFM
KEQITRARYYFKLAEDGISHLHKASRWPVWSCLMLYSKILDAIEDNDYDNLTKTAYVGKT
EKLLTLPLAYAKAVNVNGICLV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgattatgttctctacactttcagttgcacctaagccttatggccttaacccaaacaat
aggaacttgctgcatccaccattcatatcagctacaacagaaagaactcgagcactgatc
atgtcagctcctaatagacaatcaaggatctccattcttcctcgtattgatcttcacatg
cacgaagttattgcaaagcagtctcaggcagtctccctgttgccccaccaaaatgctcat
agaaagccagattttcctccattgtttcttgaagaagcttacaagaggtgtaaaaagatt
tgtgctcaaaatgccaagactttctatctaggtactttgctaatgactgaggaacagcag
aaagccatatgggcaatttatgtttggagtaggaggacagatgaacttgtggatggaccc
aatgcagaacacatgagctcagctgttcttgatttgtgggagcagagacttgaaagcatc
tttgatggaaacccccatgacattctcgatgctgcacttactgatactgtctttaagttt
gctctacatattgagcctttcaaggacatgattgagggcatgagaatggatacaaggaaa
tttcggtatgagaattttgaagagctatatctttattgctactatgttgctggtactgtt
agcctaatgactgttccagtattgggaatagcacctgattcatgtgtttctgctcaaact
atctattatggagctctttacatggctatagcaaatcagctcacaaacatccttagagat
gtaggagaggatggcttgagaggaagaatttatcttccccaagatgagttagcacagttt
gggctatgccatgaggatattttcacaagaaaggtgacagataaatggaaagagttcatg
aaggagcagattacaagggcaagatactactttaagcttgctgaagatggaatctcacat
cttcacaaggctagtcgttggccggtatggtcatgcttaatgttgtatagcaaaatcttg
gatgcaattgaagataatgattacgataacttgacaaagacagcttatgttggaaagact
gagaagcttctcactttgcctttagcatatgctaaagctgttaatgttaatgggatttgc
cttgtataa
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