KEGG   Ricinus communis (castor bean): 8271796
Entry
8271796           CDS       T01087                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcu03009]
    8271796
Ribosome biogenesis [BR:rcu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    8271796
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st NBCH_WD40 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF4 BCAS3_WD40 Beta-prop_EIPR1 Beta-prop_NWD2_C PEP5_VPS11_N
Other DBs
NCBI-GeneID: 8271796
NCBI-ProteinID: XP_002532118
LinkDB
Position
9:complement(26079269..26080935)
AA seq 413 aa
MKMSFSSHEIVLTSSPDGPITAYDTISGTTLARFTGSRSPRHGLAIVGKAYIAASHISSA
TASGSIHLYTWWSSSALHHLPLPEPVAPLAATPDGSYLFAGGLFGNVYALSIPSGNILKS
FPAHSKPVSCINISSDSSLLISGGDDGNIVVVPIFQLVEAPGSENESNLILHSFPAHDGP
VTGITVCMGICHPTIVSCSTDSTCKLWSLLDGRNLQTVAFPCSISGIALDPTEVEFYAAG
SNGLIYKGSLQAGSRKGIAQGRKLITWTQKHDGAVVSVVVINEGKNLVSAAEDGSVFIWG
IENGQLIMVIGNNMDNISDVVVARGICDGREGYGNRVGNEMNEFGGRNLGLSSKELNFRP
IKDTVNVENALAVAAKNSRKAIDKLESAIGVYERLLELILKEAKAGTSKNGEN
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgaaaatgtctttttcctcgcatgaaattgtcctcaccagctcccctgatggcccaatc
actgcctatgacaccatctccggcaccaccctagctcgcttcaccggcagccggtcacct
cgtcacggccttgccattgtaggaaaggcttatattgctgcctctcacatctcatcagcc
acagcttcaggctcaattcacctctatacctggtggtcctcgtcagctttgcaccatctt
cctctccctgaacctgtggctccacttgctgccactcctgatggctcgtatctattcgca
ggtggcctttttggaaatgtttatgctctatcaattccttcaggaaacattctcaaatca
tttcctgctcatagcaagcctgtatcttgtatcaacatcagcagtgactcgtcactcttg
atttcaggaggagatgatggtaacattgttgttgtgccaatatttcaacttgtagaagca
ccagggagtgaaaatgaaagcaacttgatactgcatagctttcctgcacatgatggtcca
gtgacaggcatcactgtttgtatgggaatatgccatcctactatagtttcttgctcaaca
gattctacctgtaaactatggagccttttggatggaagaaacctgcaaacagtagcattc
ccatgttcgatttccgggattgcattagacccaacagaagtagaattttatgctgcagga
tccaacggtttaatatacaagggatccctgcaggccggaagtagaaaagggatagctcag
ggtcgaaaattgatcacatggacacaaaaacatgatggagctgtagtatctgtggtggtg
ataaatgaaggaaagaatttggtatctgctgcagaagatggaagtgtgtttatatgggga
atagaaaatgggcagctgattatggttattggcaataacatggataatattagtgatgta
gtcgtggcaagagggatttgtgatggcagagaaggctatgggaatagagtgggcaatgaa
atgaacgaatttggtgggagaaatctggggttatcaagcaaagaacttaacttcagaccc
ataaaagatactgtgaatgtagaaaatgccttggctgtggcagcaaagaatagtagaaaa
gccatcgataagctcgagtctgcaattggagtgtatgaaagacttttggagctcattctc
aaggaggctaaggcaggcactagcaagaatggtgaaaattag

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