Ricinus communis (castor bean): 8271796
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Entry
8271796 CDS
T01087
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8271796
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
8271796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
NBCH_WD40
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF4
BCAS3_WD40
Beta-prop_EIPR1
Beta-prop_NWD2_C
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
8271796
NCBI-ProteinID:
XP_002532118
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Position
9:complement(26079269..26080935)
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AA seq
413 aa
AA seq
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MKMSFSSHEIVLTSSPDGPITAYDTISGTTLARFTGSRSPRHGLAIVGKAYIAASHISSA
TASGSIHLYTWWSSSALHHLPLPEPVAPLAATPDGSYLFAGGLFGNVYALSIPSGNILKS
FPAHSKPVSCINISSDSSLLISGGDDGNIVVVPIFQLVEAPGSENESNLILHSFPAHDGP
VTGITVCMGICHPTIVSCSTDSTCKLWSLLDGRNLQTVAFPCSISGIALDPTEVEFYAAG
SNGLIYKGSLQAGSRKGIAQGRKLITWTQKHDGAVVSVVVINEGKNLVSAAEDGSVFIWG
IENGQLIMVIGNNMDNISDVVVARGICDGREGYGNRVGNEMNEFGGRNLGLSSKELNFRP
IKDTVNVENALAVAAKNSRKAIDKLESAIGVYERLLELILKEAKAGTSKNGEN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctttttcctcgcatgaaattgtcctcaccagctcccctgatggcccaatc
actgcctatgacaccatctccggcaccaccctagctcgcttcaccggcagccggtcacct
cgtcacggccttgccattgtaggaaaggcttatattgctgcctctcacatctcatcagcc
acagcttcaggctcaattcacctctatacctggtggtcctcgtcagctttgcaccatctt
cctctccctgaacctgtggctccacttgctgccactcctgatggctcgtatctattcgca
ggtggcctttttggaaatgtttatgctctatcaattccttcaggaaacattctcaaatca
tttcctgctcatagcaagcctgtatcttgtatcaacatcagcagtgactcgtcactcttg
atttcaggaggagatgatggtaacattgttgttgtgccaatatttcaacttgtagaagca
ccagggagtgaaaatgaaagcaacttgatactgcatagctttcctgcacatgatggtcca
gtgacaggcatcactgtttgtatgggaatatgccatcctactatagtttcttgctcaaca
gattctacctgtaaactatggagccttttggatggaagaaacctgcaaacagtagcattc
ccatgttcgatttccgggattgcattagacccaacagaagtagaattttatgctgcagga
tccaacggtttaatatacaagggatccctgcaggccggaagtagaaaagggatagctcag
ggtcgaaaattgatcacatggacacaaaaacatgatggagctgtagtatctgtggtggtg
ataaatgaaggaaagaatttggtatctgctgcagaagatggaagtgtgtttatatgggga
atagaaaatgggcagctgattatggttattggcaataacatggataatattagtgatgta
gtcgtggcaagagggatttgtgatggcagagaaggctatgggaatagagtgggcaatgaa
atgaacgaatttggtgggagaaatctggggttatcaagcaaagaacttaacttcagaccc
ataaaagatactgtgaatgtagaaaatgccttggctgtggcagcaaagaatagtagaaaa
gccatcgataagctcgagtctgcaattggagtgtatgaaagacttttggagctcattctc
aaggaggctaaggcaggcactagcaagaatggtgaaaattag
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