Ricinus communis (castor bean): 8272085
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Entry
8272085 CDS
T01087
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
8272085
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
8272085
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
8272085
NCBI-ProteinID:
XP_002520781
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Position
6:21519687..21526504
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AA seq
730 aa
AA seq
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MLISLIRAHINRQVFIFLYNIFILISKKIQSLFPFPSMSQSNELQHQSSPVDPTPFDPLE
PSTPISYPIKTLHELESRAYFESFHYPFNKSSVSLDSSDVFLPNRPRLLVCHDMQGGYGD
DRWIQGGNKSDAYAIWHWYLIDVFVYFSHSLVNLPPPCWTNTAHRHGVKVLGTFLTEWEE
GRLACNKLLETEESARMYAERLAELAIALGFDGWLINMEINLDMEKIPNLKEFVSHLTKT
MHFSLPGSLVIWYDAITIHGELKWQDQLNENNKAFFDICDGIFVNYTWKRNYPKLSADVA
AGRKFDVYMGIDVFGRNTYGGGQWNVNAALEVIKNDNVSAAIFAPGWVYETKQPPDFWTA
QNRWWTLVEQSWGIMKNYPKILPFYSNFDQGYGYHISVEDGQVTEVPWNNLSCQGFQPFL
EFIDGPTPEPIQVLVDVKEASYTGGGNITFRGLLEEDGHFAKRLFQGELVMGNKPIQIIY
SVKSEGDSLLGLSFQFSSNKNEKTSILMASWDLSHFSGKFRKVIMTHQIRKPEMDPGWVV
HEGSIAMNDQILTEIHAVCYRRKPEQSKLRTEYKADGQDDSLVSSPAGYFAVLGHIAIQN
SERKSCFFPSSSWLVEGQNIKFSSDSQGSKFVSVKIIWQLKDGDHCVFSHYNIYVEKLEK
QVEVEGNTNKRVKGACKYLGVAQVTAFYVSDLSVPSTTYRLKFIIQVCDFNGDCQKLNDS
PSFQLDIEGE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcttatatcacttattcgcgcccatataaatcgtcaagtttttatcttcctctacaat
atctttattctaattagcaaaaaaattcaatcgttatttccttttccatctatgtcccaa
tccaatgaactccaacaccaatcttcaccagttgatccaactccatttgatccattagaa
ccgtcaactccaatctcatacccaatcaaaaccctccacgaacttgagtctagagcttac
tttgaatcatttcactacccatttaataaatcttctgtttcccttgatagctcagacgtt
ttcttgcctaataggcctaggcttcttgtttgccatgatatgcaaggtggttatggtgat
gataggtggattcagggagggaataagtctgatgcttatgctatttggcattggtatttg
attgatgtttttgtttacttctctcattctttggttaatttgcctcctccttgttggacc
aatacagctcatagacatggtgtcaaggtgttaggaacgttcctcacagaatgggaggaa
gggagacttgcgtgcaataaattgcttgaaacggaggagtctgctcgaatgtatgctgag
aggttggctgagcttgctattgctttaggctttgatggatggctgatcaatatggagatt
aatttggatatggagaaaattcctaatttaaaggaatttgtcagtcacctaaccaagact
atgcatttctcattgcctggatctttagtaatttggtatgatgctatcacaatccatgga
gaacttaagtggcaagaccaactaaatgaaaacaataaagctttttttgatatatgtgat
ggcatatttgtaaactatacatggaagagaaactatccaaaactgtcagctgatgttgct
gccggtagaaagtttgatgtctacatgggaatagatgtatttggaaggaatacttatggc
gggggacaatggaacgtaaatgctgcacttgaggtgataaagaatgataatgtttctgcc
gccatatttgcccctggctgggtctacgagactaagcaaccgcctgatttttggactgct
caaaatcgttggtggacccttgttgaacaatcatggggaataatgaagaattatcctaaa
atactaccattctattcaaactttgatcagggttatggctatcacatttcagttgaggac
ggccaagtgactgaagttccttggaacaacttgtcttgccaaggatttcagcctttcctt
gagttcattgatggtccaactcctgaacctattcaagtccttgtggatgtcaaagaagca
tcttacactggaggtggaaacattacatttagaggattacttgaagaagatggtcatttt
gctaaaaggctctttcagggagagctggttatgggcaataaacctattcaaattatatat
tctgttaaatcagagggcgactcactactgggcctttcttttcagttctcatctaacaag
aatgagaagacatcaatacttatggcatcttgggatctgagtcatttctctggaaaattc
agaaaagtgatcatgacacatcaaataagaaaaccagaaatggatccgggatgggttgtg
catgagggtagtattgcaatgaatgatcagatactaacagagattcatgctgtatgctac
cggcggaagcctgagcagagtaaattgagaacagaatacaaagcagatggccaagatgac
tcattagttagcagtcctgcagggtattttgcagtgcttggacacattgcaattcaaaat
tctgaaaggaagtcatgtttctttccatccagttcatggctggttgaaggtcaaaatatc
aaatttagttcagattctcagggatccaaatttgttagtgtgaaaatcatttggcaactg
aaagatggagatcattgtgtgttctcacattacaatatctatgttgagaaactggaaaaa
caagttgaagttgaaggaaacacaaataaacgagttaaaggcgcatgcaagtatcttgga
gtggcacaagttacagcattttatgtttctgatctttctgttccttccactacttacagg
ctcaaattcatcatacaagtgtgtgattttaatggggattgccaaaagctgaatgattct
ccatctttccaactcgatattgaaggtgagtaa
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