Ricinus communis (castor bean): 8272088
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Entry
8272088 CDS
T01087
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
8272088
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
8272088
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
8272088
NCBI-ProteinID:
XP_002520784
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Position
6:21507785..21512308
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AA seq
803 aa
AA seq
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MSLTNEAQSSTLDPPPFDPLQPSIPVSYPLKTLKELESRSYFKSFHYPFNKSSVSLKSSG
LDNRPRILVCHDMQGGYVDDKWVQGGNNKSAYAIWHWYLIDVFVYFSHNLVTLPPPCWTN
TAHRHGVKVLGTFITEGSDGTETCNKLLATKESAHMYAERLAELAADLGFDGWLMNIEVE
LEAKQIPNLKEFVSHLTQIMHSTVPGSLVIWYDSVTVNGRLIYQNQLNENNKPFFDICDG
IFANYWWAKDYPKNSAVVAGDRKFDVYMGVDVFGRGTYGGGEWNTNVALDVCKKADVSAA
IFAPGWVYETKQPPDFQTAQNKWWSLVEKSCGVVKSYPNTLPFYSNFDQGHGYHFSVEGG
QVSNAPWNNISSQGLQPFLEFNKNQTTDTIQVLADFKEASYSGGANITFKGTLKDHNDFT
ARLFQGRLLLGELPLHMTYSVKSDGDSQIGLCLYFSSTLNKRTSVFIAPCGKSQFSNEFS
KVIVPHRLDKPEMAPGWVIQESSIDMNGYTLTEIHALCYRSKPEHGKLRSEYISDRHDNT
TGPSPSEYFAVLGHITIKNSKENPVFPASSSWLVAGQCIKWISGSQGSKKLSIKISWKLK
DGSTSQFSKFNIYVEKLGKNAGRNSDGRIEGIQEFIGVACVETFYVSCLSIPCSTSSVKF
IIQMCGIDGTCQKLVDSPLFLLDVEASHQVAIPISNYGETDSLNTSQADTNHGRRFIKNN
DYKASKPWGNSIWYGLSIKGRATYVAVDLLQRVGKMDRQIIIGRLKQTGLSWLLMVSLVL
FGTSLWVLNNIVVKNIGGNMHLQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacaaatgaagcacaatcctccacacttgatcctcctccatttgatccatta
cagccctccattcccgtctcctacccactgaaaaccctcaaagaactcgagtctcggtct
tacttcaagtcctttcactacccatttaacaagtcatctgtttctcttaaaagctctggc
ttagataacaggcctaggattcttgtgtgccatgatatgcaaggaggttatgtagatgat
aagtgggtacaaggagggaacaacaaaagtgcctatgcaatttggcattggtatttgatt
gatgtttttgtttacttttcccataatttggttacattgcctccaccttgttggactaat
acagcacatagacatggggttaaggtgttggggactttcatcacagaagggagtgatggg
acagagacttgcaataaattgcttgcaacaaaagaatctgctcacatgtatgctgagaga
ttggcagagcttgctgctgatctgggctttgatggatggctgatgaatatagaggttgag
ttagaagcgaaacagattcctaatttgaaagaatttgtcagccatctaactcagatcatg
cactccacagttcctggatctttagtaatatggtatgacagtgtaacagtcaatggaaga
cttatatatcagaatcaactgaatgaaaataataagcctttctttgatatatgtgatggc
atatttgcgaattattggtgggcgaaagactatccgaaaaattcagcagtggttgctggt
gatagaaagtttgatgtgtacatgggagtagatgtatttggcaggggaacttatggtgga
ggagaatggaatacaaatgttgcccttgatgtgtgcaagaaggcggatgtatcagctgca
atatttgcaccaggatgggtctatgagactaagcaacctcctgattttcaaactgcacaa
aacaagtggtggagccttgtggaaaaatcatgtggagtagtaaaatcctatcctaataca
ctacccttctattcaaattttgatcagggtcatggctatcatttttctgttgaaggaggg
caagtctcaaatgctccgtggaataacatatcttcccagggccttcagccttttcttgaa
tttaacaagaatcaaactacagataccattcaagttcttgcagattttaaggaagcatct
tatagtggaggagcaaacattacatttaagggaactttgaaagatcacaatgatttcaca
gcaagactatttcagggaaggttgcttcttggggaattacctctccacatgacatattct
gtgaaatcagatggggattctcagatcggcctatgtctgtacttctcttccactctgaat
aaaagaacatcagtatttattgcaccctgcggaaagagccaattttcgaatgagttcagt
aaagtgattgtgccacatagacttgacaagccagaaatggctccaggatgggtaattcag
gagagcagcattgacatgaatggatacacactgacagaaatccacgctctatgctacaga
tcaaagcctgaacatggaaaactgagatcagaatacatatcagatagacatgataataca
acaggtccaagtccgtcagaatattttgcagtacttggtcatatcacaatcaagaattct
aaagagaaccctgtatttcctgcttctagctcgtggttagttgcgggtcagtgtatcaag
tggatttcaggctctcagggttctaagaaacttagcattaaaatcagttggaagttgaaa
gatggaagtacttctcaattttcaaagtttaatatttatgttgaaaagctagggaaaaat
gctggtagaaattcagatggaagaatagaaggaattcaggaatttattggagttgcatgt
gttgaaactttctatgtttcttgtctttccattccttgtagcacttctagtgtcaaattc
attattcagatgtgtggcatagacggaacttgccagaaactggttgattctccattattc
ctgttggatgttgaagcatctcatcaagtggccattcccatttctaattatggcgaaacg
gactcattgaacacatctcaggctgatacgaatcatgggagaaggtttatcaagaataac
gattacaaggcatctaaaccatggggaaactccatatggtatggtctttctattaaagga
cgtgctacatatgtggctgttgacttgctacaaagagttggcaaaatggacaggcaaatc
atcataggtagattaaaacaaacaggtttaagttggttgctaatggtgtctttggttcta
tttggaacctctttatgggttttaaacaatattgttgtcaagaatattggaggaaacatg
catctgcaatga
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