Ricinus communis (castor bean): 8272196
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Entry
8272196 CDS
T01087
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase isoform X1
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8272196
Transfer RNA biogenesis [BR:
rcu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
8272196
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
TrkA_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-GeneID:
8272196
NCBI-ProteinID:
XP_048230802
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Position
5:complement(4684607..4693537)
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AA seq
462 aa
AA seq
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MEEKLKWLALIGGGALLGSASTLFLLNHFPRRISGQCNKKTVELNGKDLVSEMSSGSCRV
IGDRDSEMHGGDLLTDEIVAEHLTRNIQFFGLESQRKVTASYVVVIGLGGVGSHAASMLL
RSGIGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAECLKKHFSTIFPECHIEAKVLLYD
ASSEEEILSGNPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRVADLK
ESTNDPLSRSVRHRLRKDYGIDGGIPVVFSLEKPKVKLLPFKGPSGEEDNPSNYQIVPGF
RVRIIPVLGTIPSIFGQVMASYVVTQLAGFQVQTEPVVNFDLDHYRVLHQRLIEHEESLY
GTTMEVQVDIEEVKYVAKELWHGRSAREQSAKDVGRGMWRSINELMLVRWDRTKPACVSN
LVLLKFQEADEHESRTLDDIKENEPEFFERVTSVLKRAELDF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaactaaaatggttagcattaataggaggtggggctcttttgggttctgct
tctacactctttctcctcaaccattttcccagaagaatttctggccaatgcaataaaaag
actgttgaactaaatggtaaagatcttgtatctgagatgtcttcgggaagctgcagggta
attggagatagggatagtgagatgcatggtggagaccttttaacagatgaaatagttgct
gaacatttgactaggaatattcagttcttcggtctcgagtctcagcgcaaggtcactgca
tcatatgttgttgtcattggtcttggaggtgttgggagtcatgctgcttctatgcttctt
agatcaggaattgggagactcctccttgtggactttgaccaggtttctctttcatcctta
aatcgtcatgctgttgcaacacgagcagatgttggtattcctaaagctgagtgcctgaag
aagcatttctcaacaatcttccccgaatgccatatagaagcaaaagtactattatatgat
gcatcatctgaagaagaaattctttcaggcaaccctgactttgttttggactgcattgat
aacattgacacaaaggtggcacttctagctgcatgcgtgcgaagaggtttaaaggtttta
tctgcaactggagctggtgctagagccgatccaacaagaatccgtgtggctgacttaaaa
gagtcgacaaatgatccattatctcgatctgtaagacaccgcctgagaaaagattatggc
attgatggtggcatcccagttgtattctcccttgaaaaacccaaagttaaactgcttcca
tttaagggaccaagcggagaagaagataatccttccaattatcagatagtgccaggcttt
agagttcgcataatacctgtccttggtaccatcccttccatatttggacaggtcatggcc
tcttatgtagtgacacaactagctggatttcaagttcaaacagaacctgtggtaaacttt
gatttggatcattatcgggtgctgcatcagcgtcttattgagcatgaggaatcattgtat
ggaacgaccatggaagtccaggtagacattgaggaagtgaagtatgttgcaaaggagctg
tggcatgggcgaagtgctagggaacagtctgcaaaagacgttggacgtggaatgtggcga
tctattaatgagctaatgcttgtgaggtgggacaggacaaagcctgcatgtgtgtcaaac
ttggtccttttaaaatttcaagaggcagatgaacatgaatcaaggacactagatgacatc
aaggaaaatgagccagaattctttgagagggttacatctgttttgaaacgagctgaattg
gacttttag
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