Ricinus communis (castor bean): 8272354
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Entry
8272354 CDS
T01087
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04120
Ubiquitin mediated proteolysis
rcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8272354
04120 Ubiquitin mediated proteolysis
8272354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8272354
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
8272354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
DUF5442
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
8272354
NCBI-ProteinID:
XP_048229754
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Position
5:24124576..24131022
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AA seq
736 aa
AA seq
DB search
MERRTIDLDQGWDFMLGGINKLKRILEGGEEQFSSEEYMMLYTTIYNMCTQKPPHDYSQQ
LYEKYREAFEEYINSIVLPSIREKHDEFMLRELVKRWSNHKIMVRWLSRFFHYLDRYFIA
RRSLPPLNEVGLACFRDLVYQEVCVKARDAVVVLIDKEREGEQIDRALLKNVLDIFVEIG
MGAMERYEEDFEANMLHDTGSYYFRKASNWILEDSCPDYMLKAEECLKKERDRVSHYLHS
NSEPKLVEKVQHELLVTVANQLLEKEHSGCRALLRDDKVEDLSRMYRLYHKITKGLEPVA
SVFKQHITAEGTVLVQQAEDAASSQIANGGLQEQVLIRKIIELHDKFMTYVNDCFQNHTL
FHKAMKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVRLLAY
ISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAR
ENQTSFEKYLANNPNAHPGIDLAVTVLTTGFWPSYKSSDLNLPAEMVRGVEVFKEFYDQK
SKHRKLTWIYSLGSCHLNGKFEQKPIELIVSTYQAALLLLFNTSDRLSYSEIMTQLNLTH
DDLVRLLHSLSCAKYKILLKEPTTKSISQTDYFEFNHKFTDRMRRIKIPLPVVDERKKVV
EDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRD
YLERDKENPNTFRYLA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaggacaattgacctggatcaaggatgggattttatgctggggggaatcaat
aagctgaagagaattctggaaggaggagaggagcaatttagctctgaagaatacatgatg
ctttacacgactatatacaatatgtgcacccagaagcctcctcatgattactctcagcag
ctttatgaaaagtaccgggaggcttttgaagaatatattaattcaatagtactgccatca
ataagggagaagcatgatgaatttatgcttagggagctcgtcaaaagatggtctaaccat
aaaattatggttaggtggctgtcacgtttctttcattatttggatcgctactttattgct
cggaggtcgcttcctccacttaatgaagttggactggcttgcttccgtgacctggtttat
caggaagtttgtgttaaagctagagatgctgtggtggttctgattgataaagagcgtgag
ggagagcagattgacagggctttgttgaagaatgtcctagatatatttgttgagattgga
atgggagcaatggagcgctatgaagaagattttgaagcaaacatgcttcatgatactgga
tcttactattttcgtaaggcatcaaactggatattggaggattcttgtccagactatatg
ttgaaggctgaggaatgcttgaagaaggagagggatagagtttctcattacttgcactca
aacagtgagccaaagttagtggagaaagttcaacatgaattgttggtaacagttgcaaac
caactgcttgagaaggagcattctggatgtcgtgcattgcttagagatgataaggtggag
gatctttcaaggatgtataggctttaccataaaataaccaaaggtttggaacctgttgca
agtgttttcaagcagcatattactgctgaggggacggtattggtccagcaagctgaagat
gctgcaagtagtcagattgcaaatggtggtctacaggaacaggtccttatcagaaagata
attgagcttcatgacaagtttatgacgtatgtgaatgactgttttcaaaatcacacgctg
tttcataaggccatgaaagaggcttttgagatattctgtaataaaacagttgctggcagt
tcaagtgcagaactacttgcaacattctgtgataatatcctcaagaagggtggaagtgag
aaattgagcgacgaggccatagaagaaacgctagagaaggtagtgaggctgctggcgtat
attagtgataaggacctttttgctgaattctacaggaagaagcttgctcgtcgtcttctt
tttgaccgaagtgctaatgatgatcatgaaaggagtatactgacaaaattgaagcaacag
tgtgggggacagtttacctcaaagatggaggggatggtcacggatttgacattggcaagg
gaaaatcagactagctttgagaaatatcttgcaaataacccaaatgcacatcctggaatt
gatttagcagtcactgttcttacaactggattttggccaagttataaatcctccgatctc
aaccttccggcagagatggtcaggggtgtggaagttttcaaggagttctatgaccaaaaa
agcaagcaccgaaagcttacatggatctactcgttgggttcttgtcatctcaacggcaaa
tttgagcaaaaacctattgagctgattgtgtcaacttaccaggctgctctcctgctcctg
tttaacacttcagatagactgagttattctgagattatgactcagttaaacttgacccat
gatgacttggttagattgctgcattctttgtcttgtgccaagtataagatccttctcaag
gaaccgactacaaagagcatttcccaaacggactactttgaattcaaccacaagttcact
gacagaatgagaagaatcaagattcctctccctgtggtagatgaaagaaagaaagttgtt
gaagatgttgataaagacaggagatatgcaattgatgctgcaattgtgcgcataatgaag
agtaggaaggtcttgggccatcaacaattagtctctgagtgtgttgagcagttgagtcgc
atgttcaagcctgacattaaggcaattaagaagcgaatggaggatttgatcacccgagat
tatctggagagagacaaggagaatccaaacacgttcaggtacttggcctga
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