Ricinus communis (castor bean): 8272429
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Entry
8272429 CDS
T01087
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8272429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8272429
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8272429
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8272429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Spore-coat_CotD
DUF7567
DZR
NST1
Motif
Other DBs
NCBI-GeneID:
8272429
NCBI-ProteinID:
XP_002516674
UniProt:
B9RSF5
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Position
1:32200283..32204528
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AA seq
346 aa
AA seq
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MELDSIECVSSSDGLDEDEIHHHNLHNHNNNHHHHLHHQFPSSKSYNATTNNNNNNNNNN
NNTHNVVGPTSIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
QELGDIRCLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECS
VVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE
AFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHD
GLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNSEAGVCMPNLCS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatagtattgaatgtgtgtcatcctcagatgggttagatgaggatgagatc
catcaccacaatctgcataatcataataataatcatcatcatcatctccaccatcaattt
ccctcatcaaagtcttacaatgccacaaccaacaacaacaataataacaacaacaacaac
aataacacacacaatgttgtgggtccaacatcgatcgctcctgccactagtgttcatgag
ttgcttgaatgtcctgtttgtactaattctatgtatccacctatacatcagtgtcataat
ggacacacactgtgttccacctgtaaaacaagggtacataacaggtgccctacttgtaga
caagagcttggagatattaggtgtttggcactggagaaggtagccgagtcacttgaattg
ccctgcaaatattataacttggggtgcccagagatatttccatattacagtaaacttaag
catgaggcagtttgcaactttaggccatataattgcccttatgctggatcagaatgttca
gttgttggagatattcctttcctagtttctcatttgagggatgaccacaaggtggacatg
cacacaggatgtactttcaaccatcgttatgtgaagtcaaatccccgtgaggtggagaat
gccacttggatgttgacggtcttccattgttttggccaatatttctgccttcactttgaa
gccttccagcttggcatggcgcctgtttacatggcattcctccgtttcatgggtgacgag
actgaggcacgtaattatagctacagccttgaggttggggccaatggcaggaagcttatt
tgggagggtacaccaagaagtgtccgagatagccacaggaaggtaagggatagtcacgat
ggtctcattattcaaagaaatatggctcttttcttctctggaggggataggaaggaactg
aagcttagagttactgggaggatatggaaggaacaacaaaattctgaagctggtgtgtgc
atgccaaacctttgtagctaa
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