Ricinus communis (castor bean): 8272437
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Entry
8272437 CDS
T01087
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8272437
Enzymes [BR:
rcu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
8272437
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
8272437
Prokaryotic type
8272437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
8272437
NCBI-ProteinID:
XP_002509621
UniProt:
B9RBT7
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All DBs
Position
5:complement(24154847..24158318)
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AA seq
489 aa
AA seq
DB search
MASLSTSIQPGRVRVLKEGLEKQTGPVIYWMFRDQRLRDNWALIHAVDQANKANVPVAVA
FNLFDQFLGAKARQLGFMLKGLRLLQGKIEERLQIPFFLFQGAAEDTIPQFLGECGASLL
VTDFSPLREIRKSKDEICMRISDTVTIHEVDAHNIVPIWVASEKLEYSARTIRSKINKRL
PDYLIDFPALRPPNTMWSAAANKSIDWDTLIDEVLRKGAEVPEIEWCMPGEDAAMEVLMG
TKNGFLTKRLKNYSTDRNNPLKPQGLSGLSPYLHFGQISAQRCALEACKAQKLCPQSVDS
FLEELIVRRELADNFCFYQPHYDSLQGAWEWARNTLLDHASDKREHIYSKEQLERAQTAD
LLWNASQLEMVYYGKMHGFMRMYWAKKILEWTRGPEEALAISTYLNDKYEIDGRDPSGYV
GCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFNVDSYITYVKRFVSEIKKRKAETQF
GRKAKEPCH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctatcaacctctatccaaccagggcgagttcgggtccttaaagaaggatta
gaaaagcagacgggtcctgttatttactggatgtttagagatcagcggttaagagacaat
tgggctttaatacatgccgttgatcaagctaacaaggccaatgtacctgttgctgttgct
tttaatttgtttgatcagtttctaggagctaaagctaggcaattagggtttatgttaaag
ggcttacgtctacttcagggcaaaattgaagagagacttcaaattccgttttttctattc
caaggagcagctgaagatacgattccgcagttcttaggagagtgtggggcttcactttta
gttactgatttctcacctttgagagaaattcgtaaaagcaaagatgaaatttgcatgagg
atcagtgatactgtgaccatacatgaagttgatgctcacaatattgtacctatttgggta
gcatcagaaaagttggagtacagtgctaggactataaggagtaagataaataaaaggtta
cctgattaccttattgattttcctgcattacgaccacctaatacaatgtggtctgctgct
gcaaataagtcaattgattgggatactcttattgatgaagttttaaggaaaggagcagaa
gttcctgaaattgaatggtgcatgccgggagaagatgcagcaatggaagtattaatggga
actaaaaatggattcttgaccaaaaggttgaagaattattccacagataggaataaccca
ctaaagcctcaagggctttctggtctctctccgtatcttcattttgggcagatatctgca
cagaggtgcgccctggaggcatgcaaggcacagaagctttgtcctcagtcagttgactcg
tttttggaggagttgatcgtgcgtagagaactggcagataacttctgcttctaccagcct
cattatgattcactgcaaggggcatgggagtgggctcgtaataccttgctggatcatgca
tctgacaagcgagaacatatttactcgaaggagcaattagagagggcacagacagctgat
ctgctatggaatgcttcgcagttggagatggtgtactacgggaagatgcatggttttatg
cgtatgtattgggcaaaaaagattctggagtggacaagaggacctgaagaagctcttgca
atatcaacatatctaaacgacaagtatgaaatagatggaagagaccccagcggctatgtt
ggttgcatgtggtccatttgtggcgttcatgaccagggttggaaagagcgacccattttt
gggaaaattcgttatatgaactacgcgggttgcaaaaggaaatttaatgttgacagctac
attacatatgtcaagaggtttgtgagtgaaattaagaagaggaaggcagaaactcagttt
ggtagaaaagcaaaagagccctgccattag
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