Ricinus communis (castor bean): 8272524
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Entry
8272524 CDS
T01087
Name
(RefSeq) myosin-17 isoform X1
KO
K10357
myosin V
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
8272524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8272524
04131 Membrane trafficking [BR:
rcu04131
]
8272524
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8272524
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rcu04812
]
8272524
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
8272524
mRNA cycle factors
P-body specific factors
8272524
Membrane trafficking [BR:
rcu04131
]
Others
Actin-binding proteins
Myosins
8272524
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
8272524
Cytoskeleton proteins [BR:
rcu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
8272524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
nSTAND3
GlutR_N
CbiA
TSC22
Motif
Other DBs
NCBI-GeneID:
8272524
NCBI-ProteinID:
XP_015571725
LinkDB
All DBs
Position
3:28522490..28536026
Genome browser
AA seq
1530 aa
AA seq
DB search
MATAVNIIVGSHVWVEDPKVAWIDGEVFKINGEEVHVHASNGKTVIANISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAGFGELSPHVFAVADVAYRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAVRTYLLE
RSRVCQISDPERNYHCFYLLCAAPLEERAKYKLEDPKSFHYLNQSNCYALDGVDDAEEYI
ATRRAMDIVGISEEEQEAIFRVVAAVLHLGNIEFAKGKEIDSSVIKDERSRFHLNTTAEL
LKCDAKSLEDALIKRVMVTPEEVITRTLDPVGALVSRDALAKTIYSRLFDWLVDKINNSI
GQDPNSKQLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTSFTISHYAGEVTYLADQFLDKNKDYVVAEHQDLLTASKCFFVAGLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPMIFENANIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLLRFGVLAPEVLEGNHDDKVACQMILDKRGLNGYQIGKTKVFLR
AGQMAELDARRAEVLGNAARTIQRQSRTYIARKEFIALRKSAVHLQSHCRGVLARKLFEQ
LRRQAAALKIQKNFRRYTARKSYLTLHSSAVTLQTGLRAMTARDEFRFRKQTKAAIAIQA
QVRCHIAYSYYKRLQKAALVSQCGWRQRVARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEEEKAQEISKLQDALHAMQMQVEEANARVIKEQEAARKAIEDAPP
VIKETPVIVQDTEKVEKLMAEVESLKALLLSEKQAAEQARKACADAEARNSELGRKLEDA
AQKADQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSARPKTIIIQRTPENGNV
ANGEMKVASDMIVATPNAREPESEEKPQKSLNEKQQENQDLLVKCISQNLGFSGGKPVAA
CIVYKCLLHWRSFEVERTSVFDRIIQTIASAIEVPDNNDVLAYWLSNSSALLLLLQHTLK
ASGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRALSRLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIA
HWQSIVKSLNSYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEQWCYEATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLSEITKELCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISK
SMKQVDIAEIDPPPLIRENSGFGFLLPRSE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcagttaatattatagtaggttctcatgtctgggttgaagatccgaaggtg
gcatggatagacggggaagtttttaaaataaatggtgaagaagttcatgttcatgcttca
aatgggaaaacagttattgcaaatatctccaaagtgtttcccaaggatactgaagctcct
ccaggaggtgtggatgacatgacaaagctgtcatatttacacgagccaggcgttttgcat
aacttggctgcgagatatgaacttaatgaaatctacacatacactggaaatatactgatt
gctataaacccatttcaaagattaccgcatctatatgatactcacatgatggaacaatat
aaaggtgctggatttggagagctaagccctcatgtttttgcagttgcagatgttgcatac
agggcaatgatgaacgagggtaaaagcaactcgattctagttagtggagaaagtggtgct
ggtaagactgagacaacaaaaatgcttatgcgatatcttgcataccttggaggtcggtct
ggggtggaagggcgaactgttgaacaacaagttctggaatccaatccagttcttgaggca
tttggcaatgccaaaactgtcaggaataacaattcgagtcgttttggtaaatttgttgag
atacaatttgacaagaatgggaggatatccggggcagctgtacgaacttatttgcttgag
aggtctcgggtttgccaaatttcagatcctgaaagaaattaccattgtttttaccttctc
tgtgctgcccctctagaggaaagagcgaagtataagttggaagaccctaaatctttccat
tacttgaaccaatccaactgctatgcattggatggagtagatgatgctgaggaatatatt
gcaactagaagggcaatggatatagttggcatcagtgaagaagagcaggaggcaatattt
agggttgtagctgcagttctacatcttggaaacattgaattcgcaaagggaaaagagata
gactcttctgttatcaaggatgagagatctagattccatcttaatactacagcggagctg
ctcaagtgtgatgccaagagcttagaagatgcactgattaagcgtgttatggtaactcca
gaagaggttatcacaaggactctggaccctgttggcgcattagttagcagggatgccctg
gctaaaaccatttattcccgcttgtttgactggcttgtggataaaattaacaattcaatt
gggcaggatccaaactcaaaacaactaattggtgtacttgatatatatggttttgaaagt
tttaagttcaatagttttgagcagttctgtatcaactttacaaacgaaaaactgcaacag
cacttcaaccagcatgtctttaaaatggaacaggaagaatatacaaaagaagaaataaac
tggagctacatagaattcgtggataaccaagatgtcttggatctgattgaaaagaaacct
gggggaattatagcacttctagatgaagcctgcatgtttcctaaatcaacgcatgaaact
tttgctcagaaattgtaccagacatttaaaaacaataagcgcttcatcaaacctaaactt
tctcgtactagttttaccatctctcattatgcaggggaggttacttatctggcggatcaa
ttccttgacaaaaacaaagattatgtagtggcagaacatcaggatcttctgacggcatcg
aagtgcttctttgtagctggtctctttcctccacttccagaggaatcatcaaaatcctct
aaattttcttcaatagggtcacgctttaagctgcaactccagtctttgatggagacgttg
aattcgactgagccccactatattagatgcgtgaagccgaataatgttctcaagcctatg
atttttgagaatgcgaacattattcagcaactacgttgtggtggtgttcttgaggcaatt
agaatcagctgtgctggatatcctacaagaaggaccttctatgagtttcttctccgtttt
ggtgttcttgctccagaagttctggaaggaaaccatgatgacaaggttgcatgccaaatg
attctcgataaaaggggtttgaacggttatcagataggtaagacaaaggtcttcctaaga
gctggtcagatggctgaactggacgcaagaagggcggaggtgcttggtaatgctgctaga
actattcaaagacaaagccgcacatatattgcacggaaggagttcattgcattacggaaa
tctgctgttcatttgcaatctcattgcagaggtgtattggctcgcaaactatttgagcag
ttgcgacgtcaagcagcagctttgaagattcagaagaatttcagacgatatactgccagg
aaatcctacttgactctacattcatctgcagttacgttgcagacaggcttaagggcgatg
actgctcgtgatgaattcagatttagaaagcaaactaaagctgcaattgctatccaggca
caagtgcgttgccacatagcatattcttattacaagaggcttcagaaggctgcactagtt
tctcaatgtggctggaggcaaagggttgctcggagagagctgagaaagcttaaaatggct
gccagagaaacaggtgcccttaaagaggcaaaagacaaattagaaaagcgtgtggaagag
cttacatggcgcttacagttagagaagagattgagaactgatttggaagaggaaaaggcc
caagaaatttccaaattacaggatgctctgcatgcaatgcaaatgcaagtagaagaagca
aacgccagagtgatcaaagaacaagaggcagctcgaaaagctattgaagatgcacctcca
gtcattaaggagacccctgttattgttcaagacacagaaaaggttgaaaaattaatggcc
gaggtggagagtttgaaggctttgctgctatcagaaaaacaggcagcagaacaggcaagg
aaagcttgtgcagatgctgaggccagaaactctgaactgggcaggaaacttgaagatgca
gcacagaaggcagatcagcttcaggaatcagttcaaaggttagaggagaaactttccaat
tcagagtctgagaaccaagttcttcgtcaacaagcactgaccatgtcaccgacagggaaa
tccctgtctgcacggccaaaaacaataattatacagaggactcctgagaatggaaatgtt
gcaaatggagaaatgaaggtggcatcagatatgatagttgctacaccaaatgcacgtgaa
cctgagtctgaggaaaaaccacagaaatctctcaatgaaaagcagcaggagaaccaggat
ctgctggtcaagtgtatatcacaaaacttgggattttctgggggcaaacctgtcgctgct
tgcattgtgtacaaatgtcttcttcactggagatcatttgaagttgaaagaactagtgtg
tttgatcgtattattcaaacaatagcttcagccatagaggtcccggacaacaatgatgtc
ttggcctattggttatctaattcatctgcattattgcttctgctccaacataccctcaag
gcaagtggagcggccagcttaacaccacagcggcgaaggacaacatcagcttctcttttt
gggaggatgtctcaagggcttcgggcatctcctcaaagtgctggtctctcatttcttaat
ggtcgagcacttagtagactggatgatttacgacaggttgaggccaagtatccagcatta
ctgtttaagcaacagcttactgccttccttgagaagatatatggcatgataagggacaat
ttgaagaaggagatctctcctttgcttggattgtgtattcaggcaccaagaacttcccgg
gcaagtttggtaaaagggcgctctcaggctaatgctgttgctcagcaagctttaattgct
cattggcaaagcatagtgaaaagcttaaacagttatctgaagataatgaaggcgaattat
gtacctcccttcttagtccgtaaagtgtttactcaaatattctcattcattaatgtccag
ctattcaatagtcttcttttgcggcgtgagtgttgctcattcagtaatggagaatatgtg
aaagctggtttggctgaactagagcagtggtgctacgaagcaactgaggagtttgcaggt
tcggcctgggatgaactgaagcatataagacaggctgttggattccttgtcatacatcaa
aagcctaagaagaccttgagtgaaatcacaaaggaactttgcccagtactgagcatacag
caactgtataggatcagtacaatgtactgggatgacaaatacggcacacacagtgtgtct
tcagatgttataagcagcatgagagttatgatgaccgaggactcgaacaatgctgtcagc
agttcttttctgttagatgatgactccagcatcccattcaccgtggatgacatctccaag
tcaatgaagcaagtagacattgctgagattgatcctccaccattaattcgtgaaaactct
ggctttggtttcctacttccacgctccgagtga
DBGET
integrated database retrieval system
