Ricinus communis (castor bean): 8273383
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Entry
8273383 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8273383 isoform X2
KO
K10756
replication factor C subunit 3/5
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03410
Base excision repair
rcu03420
Nucleotide excision repair
rcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8273383
03410 Base excision repair
8273383
03420 Nucleotide excision repair
8273383
03430 Mismatch repair
8273383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8273383
03036 Chromosome and associated proteins [BR:
rcu03036
]
8273383
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8273383
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
8273383
DNA Replication Termination Factors
ELG1-RFC complex
8273383
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
8273383
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
8273383
Check point factors
HRAD17(Rad24)-RFC complex
8273383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
nSTAND3
AAA_16
AAA_5
TIP49
Motif
Other DBs
NCBI-GeneID:
8273383
NCBI-ProteinID:
XP_015576240
LinkDB
All DBs
Position
5:279521..283904
Genome browser
AA seq
790 aa
AA seq
DB search
MGTSMKSTSFRYNRASQPFASNPLKQRRSGYEPSDTETDWQESPNRDRSHTNGAFGPQSP
KMDLVLPRNISPVRHGWRLSPRLDDSSPKKDSTTSPSRRRHSSKSPYKMRKEDGRTISAM
SVRRNVSPFSKSEHRRQVSSFKSAREEQDLSDNDEIIDSSRRKNQRTPGREERGSISQFG
EVSRASERSSHSRRSATAPRMRGRVKEQENNLGPGEQKEERAPSSFLRTTTSKQRERESS
HPRTPTVGEINEMVANIKMSRSPMLNAPNFESTESISPGDIFFSRDHTALTIQKKNLPKN
GNDKTNPIPRPTRFTQMDSAGHQVSTNNNNTENKSSRTLMSSGSRTTTITSSALSGHSGK
FSSESSKISDTSKTTSVSSKRFTENRKKSQADGWFSCMRRGPCRTRKSPEKHHLDEVSFI
EKAFVVESLRQFWADKHQPSSLSGFICHKQEAQLLKQLVFHNNIPHILLKGPSGSGKRSL
AMALLCEIFGGACRNISHNLRYFQVQEERAMQVAVPIASSAHHLELNVNLEPNAKHALMS
LVREISNNYALAPEVSNATFKPDYKVLVLYQVDKAAEDIQHLIKWIMDCYTDACKLILCC
EDDADILEPVTNRCRVIKVDSPVTHEIMEVLIQIARKEEFELPMNFAARIAAKSKQHLRK
AIMTLEACKEHNYPFADDQPIPSSWEEVLIELAAEILSDPSPKRLFMVRGKFQKLLLDFV
HPKLILLKLVEQFLKGVDASSKRELYYWHAYYEKRIPTGSSALLKLEEFVAKFMSLHRKR
FSSRQMDSFT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttcaatgaaaagtacctcattcagatataacagagcctctcagccctttgct
tctaatcccttgaagcaaaggcgaagtggttatgaaccttctgatacggaaacagattgg
caagaaagtccaaatcgtgatcggagtcacaccaatggagcttttggtcctcagagtcca
aaaatggacttggttttaccaagaaacatcagtcctgtgagacatggctggagactttcg
ccaagactcgatgattcttctcccaaaaaggactctacgaccagtccaagtcggaggagg
cacagcagcaaatcgccctacaagatgcgaaaggaagatggtagaaccatttcagcaatg
tcggttcgtagaaacgttagtccattctcaaaatctgagcacagaaggcaagtttcttct
tttaagtctgcaagagaggagcaggatttgtctgataacgatgagattatagactccagc
agaaggaagaatcaacgaacgccgggcagagaggaaagaggttctatctctcagtttggt
gaagttagtagagcgagcgagcgctcgagccatagtcgtagatcagcaactgcaccgaga
atgaggggtcgggtaaaggagcaagaaaataatcttggtcccggagaacaaaaggaggag
agagcaccatcgtctttcttgaggaccacgaccagtaaacagagggagagagaatcatct
catcctagaacaccgactgttggtgaaatcaatgagatggttgctaatattaaaatgtcc
agaagtccaatgctgaacgctccaaattttgaaagcacagagtctatctcacccggcgac
atcttcttttcccgtgatcacacagccttgacgattcagaagaagaacttgccaaagaat
ggtaatgataaaaccaatccaattccaaggcctacaaggtttacccagatggattctgct
ggtcatcaggtaagcacaaataataataatactgaaaataagtcatcaagaactttgatg
agttctggttcacgaactactacgattaccagctctgctctaagtgggcatagtggaaag
tttagcagtgaaagtagtaagataagcgatacaagcaagacaacaagtgtgagctcgaaa
aggttcacggaaaataggaagaagagccaagcagatggttggttttcctgtatgagaaga
gggccttgcagaaccagaaaatcacctgaaaaacatcaccttgatgaagtctcgttcatc
gagaaggcatttgtggtcgaaagcttgagacagttttgggctgataaacatcaacctagt
tctctcagtggatttatttgccacaaacaagaagctcaacttctcaagcaacttgttttt
cataacaacattcctcatattttgttgaaaggaccatctggttctgggaaaagatcatta
gcaatggctcttctgtgtgaaatatttggtggggcatgtcgaaatatatcacataattta
agatatttccaggttcaggaagaaagggcaatgcaagtagctgttccaatagcatccagt
gctcaccatctggagctcaatgtaaacctggaaccaaatgctaaacatgcactgatgagt
ttagtgagggaaataagcaacaactatgctcttgctcctgaagtcagcaatgctactttt
aagccagattataaagtactagttctttatcaggttgacaaagcagctgaggatattcag
cacttgatcaaatggatcatggactgttatacagatgcttgtaaactcatattatgctgt
gaagatgatgcagacatcctagaaccagtgaccaaccgctgcagagttattaaagttgat
tctcctgttactcatgaaatcatggaggtcctcattcagatagccagaaaggaagagttt
gaactaccgatgaattttgctgctaggattgctgccaaatcaaagcagcacctgagaaaa
gcaatcatgacacttgaagcatgcaaagaacacaactacccttttgctgatgatcaaccg
attccatccagttgggaagaagtcttgatagaacttgcagcagaaatcttaagtgatcct
tcgcctaagagattgttcatggtaaggggaaagtttcaaaagcttcttctggattttgta
caccccaagctgatcctgttgaaactcgtcgaacaattccttaaaggagtggatgctagc
tcaaaaagggaactttattactggcatgcttattatgaaaagaggattccaacaggatca
agtgctttgcttaaattagaagaatttgttgccaagttcatgagtttacacagaaagcgt
ttcagcagtcggcagatggatagtttcacatag
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