Ricinus communis (castor bean): 8273445
Help
Entry
8273445 CDS
T01087
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8273445
04131 Membrane trafficking [BR:
rcu04131
]
8273445
04121 Ubiquitin system [BR:
rcu04121
]
8273445
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8273445
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
8273445
Membrane trafficking [BR:
rcu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
8273445
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8273445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
8273445
NCBI-ProteinID:
XP_002527868
UniProt:
B9SPE9
LinkDB
All DBs
Position
10:5443494..5447440
Genome browser
AA seq
484 aa
AA seq
DB search
MLIRLSKPSSESGGGGAAKPLPVDTVTVACPDHLVLADLPVAKGIGAATAATLVKTAGRR
SRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKIME
GIFICAAPHCLKSFLKRTDFESHIQESHADLLQPNAEKENGNDTEVQSAKQYSVSDSTAR
APTRPLISPGSNSLDSEDKARRQQSREQPLARPMMQPRPPFFGQGQNYPSDPQPDNSRPP
GFDRPGIQNHFQQSMQGGPPQEQQQGILSETPMPEYPAMHPIQPPNFVIPINSNPLMTPQ
YGLPPFQPEGAQPFYGAPYEMGQMARPDATSEIGAEQGSLLGFPPGPAGVNFMSNYSQPW
NMGPAAGGQGMPDGFPNLSDSRGNAAFYQGEYGRNPGVLPMMPPPPPSANKGMEAVQGGN
AMDARDSKGILAPQPFPHPPPPPPPLPHSSQPKRGKYYSGDMGHDGQSFGWQHENRDGFG
SGQE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttaattcggcttagcaagccatcctcggagagtggtggcggaggtgcggcgaaaccc
ttgccagttgatacagtgactgttgcatgtcctgaccaccttgtccttgctgatcttcca
gttgcaaaaggcattggtgcagccactgctgctactcttgtcaagaccgctggtcgcagg
tccagacgtcagcttggcgaacgagtccatttttgtgttcgttgtgatttccctattgct
atctatggacgcctgagcccctgcgagcatgctttctgtcttgattgtgctaggagcgat
tcaatctgctatctttgtgatgagcgtatccagaaaattcagacaatcaaaattatggag
gggatcttcatctgtgcagcccctcactgtcttaaatctttcttgaagaggacggacttt
gaatcccatattcaggagagccatgcagaccttctgcagccgaatgcagagaaagagaat
ggtaatgacacagaggttcaaagtgctaaacaatattctgtctcagattctactgctcga
gctccgacaagaccactcatttcgcctggttcaaattctctagattctgaagacaaagct
cgtaggcagcagtctagagagcaaccacttgctaggccaatgatgcaaccaagacctccc
tttttcggtcaaggtcaaaattatccatcagatccccaacccgacaatagtcgtccccct
ggatttgaccggcctggcatccagaatcatttccaacaaagcatgcagggaggcccacca
caggaacagcagcaaggaattttatcagagactccaatgcctgaatacccagcaatgcat
cccattcaaccacctaattttgttataccaataaattcaaatccactgatgacacctcaa
tacggtcttcctcctttccaacctgagggagctcagccattttacggtgctccctatgag
atggggcagatggctaggccagatgcaacatcagaaattggagcagaacaaggatctttg
ctgggtttcccaccaggtccagcaggtgtgaatttcatgtcaaattattctcagccctgg
aatatgggacctgcagcaggaggtcagggaatgccagatggctttccaaacctgtcagat
tctcgtggaaatgctgcattttaccaaggtgagtacgggcggaatccaggagttctacca
atgatgcctcctcccccaccctccgctaacaaggggatggaagctgtgcagggtggtaat
gccatggatgctagagacagcaaaggcatattggcaccacagccatttccacatccgcca
ccacctcccccccccttgcctcactcatcacagcctaaacgaggtaagtattattccggt
gatatggggcatgatggacagagtttcggatggcagcatgaaaatcgtgatggctttgga
agtggccaggagtag
DBGET
integrated database retrieval system
