Ricinus communis (castor bean): 8273515
Help
Entry
8273515 CDS
T01087
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8273515
03015 mRNA surveillance pathway
8273515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8273515
03041 Spliceosome [BR:
rcu03041
]
8273515
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8273515
Spliceosome [BR:
rcu03041
]
Complex C
Other components
EJC/TREX
8273515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
NTP_transf_9
Motif
Other DBs
NCBI-GeneID:
8273515
NCBI-ProteinID:
XP_048231544
LinkDB
All DBs
Position
6:complement(14639526..14649878)
Genome browser
AA seq
427 aa
AA seq
DB search
MGSATAIEKTEEELQREIDELHRQQRQITERLRDPRGLRRGGGGFAGSGPRNFAANGARQ
RGFVRPADRNDAEDQPPAKRRLLSAVVKVEDGEIVEEHVASKDLKKESTDAEEDVGAIIE
DQSDGKPSNAQQSGWTRRDGIQRAGKRETEPPVIEHVPRVLPKNEDPSLVSRNKRMLGQL
LGTLEKFRKEDVKLSGTEAFKQRSSALQRAEQRVREESERLRQQEREQIAEKRRRDLTLR
ARVAAKTEEKKLELLFLRWSEHRKKLCNFIRTKAEPPIYYLPKKPLDEDATLLEQRREQT
FSEWKATRREELSDYQKQIAEQYLSNVENELERWQNARKARRPSNDASLQETMDKELDTH
RLEHGPKTRKIPGGSNTEEEEDVEDINVGEDDMMDDVLDVEDNGRRGDEAVKPEAGSTSP
HPDNVDQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcgccacagctattgaaaaaactgaggaggagctccagcgagagatcgatgaa
ctccatcgccagcagcgccagataacagagcggttgcgtgatcctcggggactccgaaga
ggtggaggagggtttgctggttctggtcctcggaactttgctgcgaatggtgctcgacag
cgcggcttcgttcgacctgctgatagaaatgatgcggaagatcaaccaccggcaaaacgg
cggcttctgtctgctgttgtaaaggtagaggatggagagattgttgaggaacatgtagct
tcaaaggacttgaaaaaggaatcaaccgacgcagaagaagatgttggggctataattgaa
gatcaaagtgatggaaagccatccaatgcacagcagagtggttggaccaggagggatggc
atccagagggcaggaaagagggaaactgaacctccagttatcgagcatgtgccaagggtg
ttgccaaagaatgaggatccaagcttggttagcagaaataaaagaatgctggggcaactt
ttaggtactttggagaaattcaggaaagaagatgtgaaactttcaggaacagaggcgttt
aaacaaaggtcaagtgctttacaaagagctgagcaaagagtgcgtgaagaaagtgaaagg
ctgaggcagcaagagcgtgagcaaattgccgaaaaaagaaggagagatctgactcttaga
gcacgtgttgcggccaaaactgaagaaaagaagttggaattgctttttcttcggtggagt
gagcaccgtaaaaaactttgcaattttataaggactaaggcagagcctcccatttattac
ttgccaaagaaaccattagatgaggatgcaaccctgcttgagcagcgcagagaacagaca
ttttcagaatggaaggctacaaggagagaggaactgtctgactatcagaagcagattgca
gagcagtatcttagtaacgttgaaaatgaattagaaagatggcagaatgcaaggaaagca
aggaggccaagcaatgatgctagcctacaggaaacaatggacaaagaattagatactcac
aggcttgagcatggtcctaagacaagaaagatacccggtggaagcaacactgaagaggag
gaggatgtggaagatatcaatgtcggggaggatgatatgatggatgatgtgctggatgtt
gaggataatggcagaaggggtgatgaagcagtcaagccagaagctggtagcaccagtccg
catcctgataatgtggatcagtaa
DBGET
integrated database retrieval system