Ricinus communis (castor bean): 8273772
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Entry
8273772 CDS
T01087
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8273772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8273772
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
8273772
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
8273772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_central
PAP_NTPase
PAP_RNA-bind
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
8273772
NCBI-ProteinID:
XP_048234452
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All DBs
Position
8:8509183..8515091
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AA seq
748 aa
AA seq
DB search
MVISEGLSASPPPAKQYGVTKPISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREE
VLARIDQIVKDWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSY
VNREEDFFFVLHNILAEMEEVTELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDL
DISDVSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTG
FLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDP
RKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLF
EPYLFFESYKNYLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEY
VDTSKPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHV
RRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVK
NDMPEKRNSISPQRRDSVSPDIFTHKFGGPSSECSAIAEGKGTLQLDKRTFCPDDVDGVC
TSNSSGITSLSSEIVSCEDIGTESVAGSSEGNNGSAEGSNNLVSSQSDSGDAESESLLEN
AYADGGVLQDGLQEELEPNAAVEMAPDTLGVDAEALQKPVIRHQVKFNINSVKDQSLYKE
GSRSFHVAAKKTESQQFGVEAKSVICVE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtgatttcggagggattgagtgcatccccgccgccggcaaagcagtacggcgtaacg
aaaccgatttcgactgcgggtcccactgaagctgatattcagagaactcgtgaattggag
aagttgttgggcgattctgggctttatgagagcaaagatgaagctgtcaagagagaggag
gttcttgctcggattgaccagattgtaaaagattgggtgaagcagctaactcgtttgagg
ggatacacagatcagatggtggaggatgccaatgctgtcatttttacatttggttcttat
cggcttggggtgcatggtcctggggctgatattgacacattgtgtgttgggccatcttat
gtaaatagggaggaggacttcttctttgtattgcacaacattttggcagaaatggaagaa
gttacagagctacagccagttccagatgctcatgttccagttatgagattcaagtttgat
ggaatatcaattgatcttctctatgcaagtatctcccttttagtggtaccagaagacttg
gacatttccgatgtttctgttctatacgatgttgatgagcctactgtacggagtcttaat
ggctgtagggttgctgatcaaattcttaagctcgttcccaatgttgagcattttcgcaca
acacttcgttgcttgaagttttgggctaaaagacgcggagtttattccaatgtcactggg
tttcttggtggagttaattgggctcttcttgttgctcgaatatgccaactttaccctaat
gccattcccagcatgcttgtttctagattttttagagtctatacacagtggcgttggcct
aaccctgttatgctgtgtcccattgaagaagatgaacttggattttctatttgggatcct
cgtaaaaatcctcgtgaccgaactcatcatatgccaattataacaccggcctacccatgt
atgaattctagctacaatgtttccacaagtacactgcgggtcatgatggagcagttccag
tatggtaacaagatctgcgaggagatagagctgattaaaactcaatgggccactctgttt
gagccatacttgttctttgaaagctacaaaaattatctgcaggttgacatagttgcaact
gatgttgatgacttgcgtgcttggaaaggctgggtggaatcccggttaaggcagttgact
cttatgattgatcgggacacatatgggaagttgcagtgtcatccctaccctcatgagtat
gtggatacctccaaaccatgtgcccattgtgccttctttatgggcttgcagaggaaacag
ggggagatgatacaggaaggtcagcagtttgatatccgagggacagtagacgaatttagg
aattccataaatatgtacatgttttggaaaccgggaatggagatctatgtctcccatgtt
cgtagaaagcagatcccttcttatgtttttccagatggttacagacgtgctcgacatcct
agggtcacagcacagcagcaatctgacaaaacatgctgtggagacagtgatgcttatggg
aatggttctagtgaaagaggccataagaggaaaaaggattctgatgagattgatgtgaaa
aatgatatgccagagaaacggaattctattagtccgcagaggcgagattcagtttctcct
gatatcttcactcacaagttcggtggcccatcttcagagtgctcggcaattgctgaggga
aaaggaactttgcagcttgataaaaggacattttgtcctgacgatgttgacggggtgtgc
acatctaattctagtgggataacctctctttccagtgagattgtttcatgtgaggatatt
ggaactgaatcagtggcaggcagcagtgaggggaacaatgggagtgctgaaggaagtaat
aacttggtatcttctcaaagtgattctggtgatgcagagtctgagtctcttttggagaat
gcttatgcagatggtggagtacttcaagatggattgcaggaagagctcgagccaaatgct
gcggttgagatggcgccggacacactaggagttgatgcagaagctctgcagaagccagtg
ataaggcatcaggttaagtttaacatcaacagcgtgaaagatcagagtttgtataaagag
ggaagtcgttcttttcatgtcgcggctaagaagacagaaagccagcagtttggtgtggag
gcaaagagtgtcatttgtgttgagtga
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