Ricinus communis (castor bean): 8273812
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Entry
8273812 CDS
T01087
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8273812
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
8273812
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
8273812
Prokaryotic type
8273812
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
8273812
NCBI-ProteinID:
XP_048234022
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Position
8:complement(8890614..8897147)
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AA seq
982 aa
AA seq
DB search
MQNLSSSTKPLQNLSLKQEKQSEAKQMPQISSLRLLFSPLKPSLPFCPSKPKPYSIFTVL
SSSSSSSSKRYRIAPNNHRSFRFRTRENSTFSSRENNSDNNIKKKSKERDKKQVPMEENG
NQSFGYNKRRAEGRDKSDKAKRNLQMKVRKLNPTNTISYVQILGTGMDTQDTSPSVLLFF
DKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGGIPGLLLTLAGMGDEGMSV
NIWGPSDLQYLVDAMKSFIPHAAMVHTTSFGSDATAQFGASNFTDPIILVDNEVVKISAL
LLRPSCSKGSAVKPGDMSVIYLCELPEIMGKFDPVKAKALGLNPGPKYSELQSGQTVKSD
RQNIMVHPSDVMGPSIPGPIVFLVDCPTESHVEELLFMQFLHSYYADYSGNQSENEKTVT
CIIHLGPASVISSPNYQKWMKNFGSAQHIMAGNEMKNVEIPILKSSARIAARLNYLCPQF
FPAPGIWSLKQLKSSKEDYIYSGEVCVSKSAGRILAENLLKFTLRPHAHLGLDKSNIPSL
MAPSEVINELLTELPEIVDAAQHVRQFWHSSGEVKRDIAFGQDNNVMIEEPWLGENIVPS
CLENIRRDDMEIVLLGTGSSQPSKYRNVSSVYINLFSKGGLLLDCGEGTLGQLKRRYGVE
GADSVVRNLTCIWISHIHADHHTGLARILALRHDLLKGMPHEPLLVVGPRQLKRFLDAYQ
QLEDLDMQFLDCRSTTSATWEACEGNSESKLDHSAPAEGSPNITENVNKSTVKTESTLFA
RGSRMQSYWKRPGNLVDNNAFALLSNLKKVLNDAGLETLISFPVVHCLQAFGVVLTASER
INSVGKVIPGWKIVYSGDTRPCPELVEASHGATVLVHEATFEDDLMDEAVAKNHSTTKEA
IEVGNLAGAYRIILTHFSQRYPKIPVFDESHMHKTCIAFDMMSVNVADLPVVPRVLPYLK
LLFKNEMVVDELDDVNAVSAFS
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatctatcttcaagcacgaaacccttgcaaaatctctctttaaaacaagagaaa
cagagtgaagcaaagcaaatgccccaaatctcaagtctgcgcctcctgttctctcctcta
aaaccctctttaccgttctgtccctctaaaccaaaaccttactctatcttcactgtcctc
agttcctcttcttctagttcatcaaaacgataccgcatagctcccaacaaccaccggtct
ttcaggtttagaaccagagagaatagtactttcagtagtagagagaataacagtgataat
aatattaagaagaagagtaaagaaagggataaaaaacaggtcccaatggaagagaatggt
aatcagtcttttgggtataataaaagaagggctgaaggtagagataagagtgataaagcc
aaaagaaatcttcagatgaaagttagaaagctcaatcctactaatacaatttcttatgtg
caaatcctagggactggaatggacactcaggatacatcaccttcagttttgcttttcttt
gacaagcaaagattcatttttaatgctggtgagggattacagcggttctgcacagagcat
aagattaagctatcaaagatagatcacatctttctctctcgtgtatgctcagaaacagct
ggtggaattccaggtttgttgttgactttggctggcatgggagatgaaggtatgtcggtc
aatatatggggcccttcagatcttcaatatttggttgatgctatgaagtctttcattcct
catgctgccatggttcacacaacaagcttcggttctgatgctactgctcagtttggagca
agcaactttacagatcccatcatccttgttgacaatgaggtcgtcaaaatatcagccctt
ctccttcgaccaagctgttcaaaaggatctgcagtaaagcctggtgatatgtcagtgata
tatctctgtgaattgcctgaaattatggggaaatttgacccagtaaaagcaaaagctctt
ggtctgaatcctggaccaaaatatagtgaactgcaatcaggacaaacagtgaagtcagat
cgccagaatatcatggttcatccaagtgatgtaatgggtccttcaattcctggtccaatt
gtatttctagttgactgcccaacagaatcccatgtggaggaattattattcatgcaattt
cttcatagttactatgcagattactcaggtaatcaatcagagaatgagaaaactgttact
tgtatcattcatttaggtcctgcttctgtaataagtagccccaattaccagaagtggatg
aagaactttggttcagcacaacacattatggctggaaacgaaatgaagaatgtggaaatt
ccaatccttaaatccagtgcaagaattgctgcgaggcttaattacctgtgtcctcagttt
tttccagctccaggtatctggtcacttaagcagcttaaaagctcaaaagaagactacatt
tattcaggcgaggtctgtgtctcaaagtctgctggaaggatattggctgaaaatcttctt
aagttcactttgcgtcctcatgctcatcttggtctggacaaatccaatattccaagtttg
atggctccctcagaagttattaatgagttacttacagaacttccagaaattgtagatgct
gcccagcatgtccgccagttctggcacagttctggagaagtgaaaagagacatagctttt
ggacaggacaataatgttatgattgaagaaccatggctaggagagaatatagttccttct
tgtttggagaacatcaggagagatgatatggagattgtgcttctgggaacaggttcatct
cagccatctaaataccgaaatgttagttctgtctatattaatctcttctccaaaggaggt
ttgcttctagactgtggggaaggaacacttggacaactgaaaagaaggtatggtgtggag
ggtgctgatagtgtcgtgagaaatctaacgtgtatctggatatctcatattcatgctgat
caccatacaggattagcaagaatacttgctctacgacatgatttgttgaagggcatgccc
catgagccattacttgttgttgggccaaggcaacttaagagatttttagatgcatatcaa
caactggaggacctagatatgcagtttcttgattgtaggagcaccactagtgctacatgg
gaagcttgtgagggcaatagtgaatcaaaactcgatcactcagctccagcagaaggtagt
ccaaatattactgaaaatgtgaacaaatctacagtaaaaaccgagtcaactttgtttgct
agaggtagccgaatgcaaagctattggaaaagaccaggaaatctggttgacaataatgct
tttgcacttttgagcaatttgaagaaagtgctcaatgatgcagggttggagactttaatt
agtttcccagttgtgcattgtcttcaggcatttggcgttgtgttgacggcatcagagaga
ataaattctgttggaaaagttataccagggtggaagattgtgtactcaggtgacactagg
ccctgcccagaactggtagaagcgtcacatggagccacagtccttgtacacgaggcaact
tttgaggatgacttgatggatgaagctgtagccaaaaaccacagcacaacaaaggaagcc
atagaagtagggaacttagctggagcatatcgaatcatcctcacccacttcagtcagaga
taccccaaaatacctgtttttgatgagtcacacatgcacaaaacatgcatagcttttgac
atgatgagtgttaacgtagcagatttaccagtggttcccagagtacttccataccttaaa
ttgcttttcaaaaatgagatggtagttgacgaattagatgatgtcaatgctgtaagtgca
ttttcttga
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