Ricinus communis (castor bean): 8274098
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Entry
8274098 CDS
T01087
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8274098
04121 Ubiquitin system [BR:
rcu04121
]
8274098
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8274098
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8274098
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8274098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
DUF7560
zf-Nse
zf-C3HC4_3
Zn_ribbon_8
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
8274098
NCBI-ProteinID:
XP_048227401
LinkDB
All DBs
Position
2:complement(6852741..6854954)
Genome browser
AA seq
342 aa
AA seq
DB search
MSLSPPRTRIRTYDATTRTFQPYWCYQCHRMVRIAASDPSEIICPRCSSQFLCELEMNRQ
RLVVDFAAFDPSPEARLLEALSLTLDPPIRRRRRRTLDFGLDEPEWGTRGRSWFGRPNPE
AEIHPRRRRNRSLDGRDNWEEEPGIQPSPRTWIVLRPFDPFSPIQPNSRTGNLIPPRANP
RDYFLGPGLNDLIEQLTQDDRPGPPPAPESTVGAIPSVKINASHLVNDSDCPVCKEEFKV
GGEARELPCKHIYHTDCIVPWLRLHNSCPVCRQALPVLPENITLPENSTTQNDQECQEDG
EGTNGRCLRWRRQLANLWPFRPRYGRIAPHGEDHVGTSQGGT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaagcccaccaagaacaagaataagaacatatgacgcaaccacaagaactttt
caaccatactggtgctaccaatgtcatcgaatggtcaggattgctgcttcagatccatca
gaaatcatatgtcctcgctgttctagtcagttcctttgtgaacttgagatgaatagacaa
agactagttgttgatttcgctgcttttgatccctcccctgaagctcgcttacttgaagca
ttgtctctcacgcttgacccaccaattagaagaagaagaagaagaacattagattttggt
cttgatgaacctgaatggggaactcgtggcaggtcttggtttgggagacccaatcctgaa
gctgaaatccatcccaggaggcgtcgaaatcggagtttagatgggagagataactgggaa
gaagaacctggaattcaacctagcccaagaacatggatagttcttcggccatttgatcct
ttctctccaattcaaccaaattcccgaactggaaacctgattccgccaagggctaatcca
agagactactttctcggtccaggactaaatgacttgatcgaacaactgactcaagatgac
agaccagggccacctcctgcaccagaatcaacagttggagcaataccaagtgtaaaaatc
aatgcaagtcatttggtaaatgactcagattgtccagtttgcaaggaagagttcaaagtt
ggaggggaagcaagagaattgccctgtaagcacatttaccatactgattgcattgttcct
tggttgaggttgcacaattcctgtcctgtctgtagacaagcgttgccggtccttcctgaa
aacattactttacctgaaaattctactactcaaaatgaccaagaatgtcaagaagatgga
gagggcacgaacgggaggtgcctgagatggaggaggcagctggcgaatttgtggccgttt
cgtccaaggtatggaagaatcgctcctcatggagaagaccatgttggcacttctcaagga
ggaacctaa
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