KEGG   Ricinus communis (castor bean): 8274186
Entry
8274186           CDS       T01087                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8274186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8274186
Enzymes [BR:rcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     8274186
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     8274186
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 8274186
NCBI-ProteinID: XP_002515428
UniProt: B9RNV9
LinkDB
Position
3:32523007..32528743
AA seq 1203 aa
MVEYDDAMEQDNDIGTSSKTEKLFKASTDMDIDFDSDSGSDCDFMDSSTSLTDIGEAKLK
DFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDPSKKGENEWRY
ASVKFGKVALEKPTFWSGADEHKMLPRHARLQNMTYSSKMKVNVSVEVYTRKVVRSDKFK
TGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGYFLIKGAEKVF
IAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKKCLTVYFLSTE
IPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFRRGKEALEYVV
RQIRGTRFPPGENEDFFELYLFPTLHSLRQKARFLGYMVKCLLQAYNGQRKCNNWDSFRN
KRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFS
TGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRV
CFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPEDSHSDLDEKDKVFLN
GEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRPLLVVQNL
HKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTHCELD
MSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPL
FRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGM
FRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSGD
IVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMH
GQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKYA
TPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVK
FRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQ
KCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFET
RLC
NT seq 3612 nt   +upstreamnt  +downstreamnt
atggtagagtatgatgatgccatggaacaagataatgatatcggcacaagtagtaaaacc
gagaagctttttaaagcatccaccgacatggacattgattttgactccgattctggctcc
gattgtgattttatggactcatctacaagtttaaccgatataggggaagcaaaactgaaa
gatttttgtaacaaggcagcaactttgttttttaacgagtatggtttaattagtcatcaa
attaactcatacaatgattttattaacaatgggatacaaaaggcttttgattcatttggt
gagttggttgtggagcctggatatgatccatctaagaagggtgagaatgaatggagatac
gcttctgttaagtttggtaaggttgccttagaaaagccaactttttggtctggtgctgat
gaacataagatgcttcctagacatgctaggcttcagaatatgacatattcctccaagatg
aaagtcaatgttagcgttgaggtctacactcgaaaagttgttagaagtgacaagtttaaa
actggcaaagatcaatatgttgacaaggaggttctaaatacagataataggaatatcaca
attgggagtttgcctgtgatggtgaagtctgacctttgttggatgaaaactgctgaaaaa
ggcgattgtgactttgatcatggaggttactttttgatcaagggtgctgagaaggttttc
atagcacaagagcaaatctgtttgaagagactctggatttcaaatatacaggggtggaca
gtctcatacaagtctgaaattaagaggaatagattgattgttaggttagtggggctttct
gcacttgaagacgttaaagcagaaaagaaatgtctgactgtgtatttcttgtcaacagag
atccctctatggattttgttttttgcccttggtgtcacctcagacaaagaagtgattgat
ttgattggttatggctccaatgatgctaggattgtgaatatcttctttgcctccattcat
gatgctgatgagaaaactgaggggtttcgcagggggaaggaggctctcgagtatgttgta
agacagatacggggaaccagatttccaccaggggaaaatgaagatttctttgaattgtat
ctgtttccaactcttcatagtctaaggcaaaaagcccggtttctaggctatatggtgaag
tgccttttacaagcatataatggccaaagaaaatgcaataactgggatagttttcgaaat
aaaaggttcgagttggctaaagagttgctagagcgggagctaaaagtacatattgcacat
gcccgtaggcgcatggccaaagctctacagaaggacctgtatggagatcgggatgtgcgc
ccgattgagcattatttggatgcttctatagtcaccaacggtttgtcaagagcattctca
actggagcatggtcacatccgtacaagagaatggaaaggatttctggtgttgtagcaaat
ttgggccgtgcaaatccattgcaaactatggttgatttgcggaaaacaagataccatgtc
caatacacggggaaagttggagatgcgagattcccgcacccttctcactggggcagggtt
tgctttctttctactcctgatggtgaaaactgtggacttgtaaagaatttggccactact
ggacttgttagtgtaaacatattagaacctctaatcgacaaattgattgctcgtggaatg
gagaaagttcctgaagattcccattctgacctggacgagaaggataaagtgtttctcaat
ggggaatgggttggagtttgtgaagattctcgcttgtttgttgccgagcttagacgcctg
cgacggaggaagaagttgcctcagcaggtggaaatcaaaagagatgaacagcaacaagaa
gtacgcatattttctgatgctggaaggattttacgcccccttttggttgttcagaattta
cataagatagaagcatttaaagggggaaattgtaccttccaatcacttctggacaaggga
attattgagtttgtcggaactgaagaagaagaggactgcagcactgcatggggtatcaaa
tttcttttatcaggagttgatgggaagcaatcgctgaagtacacacactgtgaacttgac
atgtcctttttattaggattgagttgtggaatcattcccttcgccaatcatgatcatgca
agaagagttctataccaggctcagaaacattctcagcaagctattggttttcccacaaca
aatccaaacatcagagtggacacgctatctcatcaattgtactatccccaaaggccactt
tttcggacagtgacttctgattgccttggaaaacctggagacacacgaggtcataatgga
attgtaccaaagcccgagttgtataatggtcaaaatgctattgtggcagtcaacgtccat
ctaggatacaaccaagaggactccttggtcatgaatcgtgcttctttggagcgcggcatg
tttcggtcggaacatatcagaagttataaggctgatgttgataacaaggaattattagac
aagaggaggaagtatgatgacaatgtaaattttgggaagataccaagtaaaattggacgt
gttgacagccttgatgatgatggctttccttttattggtgctaatcttcaaagtggtgat
attgttattgggaggtgtgctgaatctgggcctgatcacagtataaaactgaagcacact
gaaaggggcatggtccagaaagttgtattgtcttcaaatgacgaggggaagaattttgct
gttgtgtctctgagacaggttcgttctccatgtcttggagacaagttctcaagcatgcat
ggacaaaagggtgttctaggatttttggagtctcaagagaacttccctttcacaagacag
ggaatagtccctgatattgttataaatccgcattcatttccttcacgacaaactcccggt
caactcttagaggctgctttgggaaaggggattgcctgtggtggttcaatgaaatatgcc
actcctttctccactctgtctgttgaagcaatcacaaaccagctgcacagggctggattt
tcaagatggggaaacgaaagagtttacaatgggcgaactggtgaaatggttcgatctctc
atatttatgggtcccacattctaccagcgattgatccacatggctgaagacaaagtaaag
ttccgcaacactgggcctgttcacccactcaccagacagccagttgcagatcgcaagcgt
tttggtggtatcaagtttggagagatggagcgcgactgccttatagctcatggtgcatct
gcaaatctgcatgagcgcctttttactctcagcgactcttcacagatgcatatttgccag
aaatgcaagaacgtggcaaatgtgattcaacgggcggtgcctggtggtcgcaagattagg
ggtccatattgccgggtttgtgagtctgttgatgaaattgttaaggtaaatgtaccttat
ggggccaagttattgtgtcaggaacttttcagcatgggcataagtttgaagtttgaaacc
cggctttgttga

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