Ricinus communis (castor bean): 8274322
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Entry
8274322 CDS
T01087
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
rcu03015
mRNA surveillance pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8274322
09122 Translation
03013 Nucleocytoplasmic transport
8274322
03015 mRNA surveillance pathway
8274322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8274322
03041 Spliceosome [BR:
rcu03041
]
8274322
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8274322
Spliceosome [BR:
rcu03041
]
Complex C
Other components
EJC/TREX
8274322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
8274322
NCBI-ProteinID:
XP_002513523
UniProt:
B9RIF4
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All DBs
Position
4:31181006..31183945
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AA seq
199 aa
AA seq
DB search
MANADAEAVDFEPEEDDLMDEDGGVDADASPRAPLPKLKSAITGGAASSLSAPRKTKGRG
FREEADADRQTRLASRGDFDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDF
GEIKNLHLNLDRRTGFVKGYALIEYEKFEEAQNAIASLNGTELLTQIINVDWAFCNGPTK
RKNMRSGRTHRSRSPRRRY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcagatgcagaagcggtggacttcgagccagaggaggacgatctgatggac
gaagatggaggcgtggacgccgacgcctctcctagggctccacttccaaagctaaagtca
gcaattaccggaggtgcagcttcatcactttctgctcctaggaagactaaaggccgtggc
tttagagaggaggctgatgccgaccgccaaactcgccttgcctctcgcggtgactttgat
tccctcggcaccgatggcgggcccggcccccagcgatctattgaaggatggattatctta
gtcaccggtgtgcatgaggaggcacaggaggatgatctgcaaaatgcttttggtgatttt
ggtgagattaaaaatctgcatctaaatcttgatagacggactgggtttgttaagggttat
gcactgatagaatatgagaaatttgaggaagcacaaaatgcaatagcctcattgaatgga
acagaacttttgacacaaatcatcaatgttgactgggcattctgcaatgggcccaccaaa
agaaagaatatgagatcaggacgaacgcatcgatcaaggagtccgaggaggagatactaa
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