Ricinus communis (castor bean): 8274386
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Entry
8274386 CDS
T01087
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X2
KO
K03093
RNA polymerase sigma-I factor
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8274386
Transcription machinery [BR:
rcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
8274386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
8274386
NCBI-ProteinID:
XP_002513587
UniProt:
B9RIL8
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Position
4:30814984..30818648
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AA seq
501 aa
AA seq
DB search
MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS
KGKKRRGKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDINGLIRKGRQRKRKT
GEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNEKIE
ELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPT
DGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQA
GVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKL
ELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEFINGITDIDGG
DKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYE
VKALMKLKHPARVDYLRRYVV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaactgcttctagctcagctgctcgtacaccattaggattgagcttgaaa
ttctcgacttacagatctacagtaaagagatcactggttgtagcatttaaagaagataaa
gcaaatgatataattttggttccacctcgcgagcgaactccattgcccatagaaacgtcc
aaggggaagaagagacgagggaaaactaacagggaagtttcttcgggtaccttggaagtg
gattacaatgaagctgctgccaagcttgaaaacatttacaaacttagccctgcaactgat
acttctgatgttgacataaatggcttgattaggaaaggtcgtcaaaggaagaggaaaact
ggtgaaggagatgagaaagcagagaacagaactagtagaaccattgttaggaaccgtgca
aagaaaaccaaacgattgagtcttgataaaaggattgcactgaagaagaacgaggaagag
gaagtagtaggtccaattagaaagaaaaaggattccaaggatgataatgaaaagattgag
gaactcgtgaggacatattctgcctcgactaatctggttagcttggattggaggaaaatg
aagatacctccagttcttccttccacagaacatgcatggttgttcaagttgatgcaaccc
atgaagacactccttccagtgaaagcggacttgcaaaagaatttgggaagagacccaact
gatggtgaattagctgaggcaactaatatgaatgtggagaaagtaagaaaacagttggag
gttggtcgagctgctagaaacaagctaattaagcacaatctccggcttgtaatgttcgta
atgaataaatattttcaagactttgcaaatggcccaagatttcaagacctttgtcaagca
ggagtaaagggacttattactgcaatcgatcgctttgaaccccagaggagatttcagctc
tccacatatagccttttttggattagacatgccataatacgatcaatgacactctcaagc
tttacaaaagtatcatttggccttgaatcagtcagaacagagatccaaaaagcaaaactc
gagttattgattgagcttcaaagacggccaacagaggaggagataattgagagggtcggc
atttctgctgagaggtatcatgaagtaattagggccgcaaaacctgccctatctctgcat
gcaagacatgcagttacccaagaagagttcattaacgggattactgacattgatggaggt
gataagcggaggcagccggctcttctcaggcttgctcttgatgatgtgcttgattctctg
aagcctaaggagagcttagtgattagacagagatatgggcttgatggtaaaggtgataga
acgctaggagagattgctggaaatttaaatatctcaagagaaatggtcaggaagtatgaa
gtcaaggcgctcatgaagctcaagcacccagctagagtggattatctacgccgctatgtt
gtctga
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