KEGG   Ricinus communis (castor bean): 8274974
Entry
8274974           CDS       T01087                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03030  DNA replication
rcu03410  Base excision repair
rcu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    8274974
   03410 Base excision repair
    8274974
   03450 Non-homologous end-joining
    8274974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcu03032]
    8274974
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8274974
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcu04147]
    8274974
DNA replication proteins [BR:rcu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    8274974
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     8274974
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     8274974
Exosome [BR:rcu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8274974
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc tRNA_NucTransf2 PM2_P3 HHH_2
Other DBs
NCBI-GeneID: 8274974
NCBI-ProteinID: XP_048225769
LinkDB
Position
10:13337880..13343351
AA seq 383 aa
MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
VTSHLQGMFSRTIRLLEAGMKPVYVFDGQPPDLKKQELAKRYSRRADATEELAAAVETGN
KEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAECAALCKSGKVYAVASED
MDSLTFGAPRFLRHLMDPSSRKVPVMEFETSKILEELNLTMDQFIDLCILSGCDYCDSIR
GIGGMTALKLIRQHGSIENILENMNKERYQIPEDWPYQEARRLFKEPLVLADEEEPELKW
TAPDQEGLITFLVNENGFNNDRVTKAIEKIKAAKNKSSQGRLESFFKPVANSSIPIKRKE
TPDHTAKETSAKKSKAGGGRKKK
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgggtatcaagggtttaacaaagctgttggctgataatgctcctaaagctatgaaagag
cagaagtttgagagctattttggccgcaagatcgctattgacgctagcatgagcatctac
cagttccttattgtagtaggaagaagtggaactgaaatgttgactaatgaagctggtgaa
gtcactagtcacttacaaggcatgtttagtcggacaattagacttctcgaggctggaatg
aagcccgtctacgtgtttgatgggcagcctccggatttgaaaaaacaggagctagcaaaa
cgttactcaaggagggcagatgctactgaggaattggctgcagctgtggagactggtaat
aaggaagacattgaaaaattcagtaagcggactgtgaaggtgacaaaacagcataatgaa
gactgcaaaagacttttaagactaatgggagtacctgtaattgaggctccttctgaagca
gaggcagagtgtgctgcactttgcaaatcaggaaaggtttatgctgtagcttctgaggac
atggattccttaacttttggagctcctaggtttcttcgtcatttgatggatcccagctca
agaaaagtcccagttatggaatttgaaacttcaaagattttggaggagctgaaccttacc
atggatcaatttattgacctctgcatcctttctggatgtgattattgtgacagcattcga
ggaattggaggcatgactgccttgaagcttattcgtcagcatggctccatagagaatatt
ttggagaacatgaataaagagaggtaccaaataccagaggattggccatatcaggaggct
cggcggctttttaaggaaccacttgtccttgctgatgaagaggaacctgagcttaagtgg
actgccccagatcaagaggggctgataacttttctggtgaatgaaaatgggttcaataat
gatcgggtgacaaaggccatagaaaaaattaaagcagctaagaacaagtcatcacagggc
cgattggaatctttttttaagccagttgccaactcatctattcccattaagcggaaggaa
acacctgatcacacagccaaagaaacaagtgctaaaaagtcaaaggctggaggtggtagg
aagaagaagtag

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