Ricinus communis (castor bean): 8275074
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Entry
8275074 CDS
T01087
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8275074
03036 Chromosome and associated proteins [BR:
rcu03036
]
8275074
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8275074
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8275074
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8275074
microRNA pathway
RISC loading complex
8275074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
8275074
NCBI-ProteinID:
XP_002526275
UniProt:
B9SJV6
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All DBs
Position
2:21953641..21963444
Genome browser
AA seq
1063 aa
AA seq
DB search
MVRKRRTEAPASGGESSEPHEAASGGSQRPYERNAPPQQGPGGPYQGGRSWGPQSQQGGR
GGGGRGRSGGMSQQQQYGGGPEYQGRGRGPPQQGGRGGYGGGRSSSNRGGPPSVGPSRPP
VPELHQATLAPYQAGVSPQLMPSEGSSSSGPPEPSPVVVAQQMQELSIQQEVSSSQPIQA
PPPSSKSMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVM
EQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFISKEFKITLIDEDDGSGGQRREREFRV
VIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQ
PLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVNQLLNRDVSSRPLSDA
DRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETY
GFVIQHTQWPCLQVGNQQRPNYLPMEVCKVVEGQRYSKRLNERQITALLKVTCQRPQERE
RDIMQTVHHNAYGNDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGREKDCLPQVGQW
NMMNKKMVNGGTVNNWICINFSRNVQDSVARGFCYELAQMCYISGMAFNPEPVLPPVSAR
PEQVEKVLKTRYHDAMTKLQQGKELDLLIVILPDNNGSLYGELKRICETDLGLVSQCCLT
KHVFRMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGED
SSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKEWQDPVRGRVTGGMIKELLIS
FRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHH
TRLFANNHNDRNAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWD
ENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSG
PVGGRGGMGGGAGARSTRGPAASAAVRPLPALKENVKRVMFYC
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgaggctcctgcaagtgggggtgagagctctgagccccat
gaagcggcaagtggaggatctcaacggccatatgagaggaatgcaccacctcaacaggga
ccaggtggaccataccaaggtggaaggagttggggtccgcagtctcagcaaggaggtcgc
ggcggtggtggacgtggacgtagcggtgggatgtctcaacaacaacagtatggtggtggc
cctgaatatcaaggcaggggaagaggtccacctcagcaaggtggtcgaggaggctatggc
ggtggtcgctccagtagtaaccgtggaggtccaccttctgttggtccatccagacctcca
gttcccgagctgcaccaagcaaccttggctccttaccaagctggggtgtcccctcagctg
atgccatctgaggggagctcttcttctggtccaccagagccatctccggtggtagtagcc
caacagatgcaggagctctctatccagcaagaagtttcttcaagccaaccaatccaggca
ccaccaccctccagcaaatcaatgaggttcccacttaggcctgggaagggtagcactgga
ataaggtgtatagtgaaggctaaccacttctttgccgaattacccgacaaggatttgcac
caatatgatgttacaataacaccagaggtcacatcacggggtgtcaaccgtgctgtaatg
gaacaactggttaagttgtacagagagtctcatcttggaaagcgtcttcctgcatatgat
ggccgaaagagtctatacactgctgggccacttccctttatatcaaaggaattcaaaatc
actctgattgatgaagatgatggatcaggcgggcaaaggagagagagggaatttagggtt
gtgatcaaattagctgctcgtgcggacctgcatcatttagggctctttttgcagggaagg
caagcagatgcaccacaggaagcccttcaagttcttgacattgttctgcgagagttacct
actactaggtattgccctgtcggtcgatcattttattctcctgatctaggaagaaggcaa
ccccttggtgagggtttggagagctggcgtggtttttaccaaagcattcgacctacacag
atgggattgtctttaaatattgatatgtcttccactgctttcattgaaccgctaccagtc
attgactttgtgaatcaactgttgaaccgagatgtttcttctcgaccattgtctgatgct
gaccgcgtgaagattaaaaaggctcttagaggagtcaaggtggaagttacacaccgtgga
aatatgcgcagaaagtaccgcatatctggtttaacatcacaggcaacacgagagttgact
tttccagttgacgaaagaggaacaatgaaatctgtcgtggagtacttctacgagacatat
ggttttgtaattcaacacacgcaatggccctgtctacaagtggggaatcagcagaggccg
aattatctgcctatggaggtttgcaaggttgttgagggccagaggtactccaagagactg
aacgagaggcagataactgccttgctgaaggtgacctgtcagcgtcctcaagaaagggag
cgtgatattatgcagactgttcatcataatgcgtacggcaatgatccttatgcaaaggag
tttggaatcaaaattagtgagaagcttgcttcagttgaagctcgcattttgcctgcccca
tggcttaaatatcatgatactggtagagagaaggattgcctgccacaagttggacaatgg
aacatgatgaataagaaaatggtcaacgggggaacagtgaacaactggatctgcataaat
ttttctagaaatgttcaagacagtgtggcccgtggattttgctatgaacttgcacaaatg
tgttacatatctggaatggcatttaatcctgaacctgtacttcctccggttagtgctcgt
ccagagcaggtagagaaggtattgaaaactcgttaccatgatgccatgacaaaactccaa
cagggcaaggagcttgatctgcttatcgtaattctccctgacaataatggctctctttat
ggtgaactgaagcgcatttgtgagacggatcttggtcttgtttctcagtgctgtttaaca
aagcatgtgttcaggatgaacaaacaatatttggcaaatgtggcattaaaaattaatgtt
aaggttgggggaagaaacactgtgcttgttgatgcattatcaaggcgcattcctttggtt
agtgatcggcccactattatttttggtgctgatgtcacccatccacatccgggggaagac
tcgagcccatctattgcagctgttgtggcttctcaagattggccagaagtaacgaaatat
gctggcttggtttgtgcacaagcccatcggcaagagcttattcaagatctctttaaagaa
tggcaagaccctgtgagaggaagagttactggtggcatgattaaggaactccttatatct
ttccgcagagcaactgggcagaaacctcagcgtattatattttacagggatggtgttagt
gaaggacaattctaccaagtgctgctgtatgaacttgatgctatccggaaggcgtgtgct
tctttagaaccaaactatcagcctccagtgacatttgttgtggttcagaagcgtcaccac
actaggttgtttgcaaacaaccataacgaccgtaatgctgttgacaagagcggaaatata
ctgcctggtactgtcgtggactctaagatctgccatccaactgaatttgacttctatctg
tgtagccatgctgggattcagggtaccagccgtccagctcattaccatgtattatgggat
gagaacaagtttactgccgacgggttacagtcccttacaaacaatctttgctacacatat
gcgagatgcacgcgctctgtttccatcgtacctcctgcatactatgctcatcttgcagca
tttcgagctcggttctacatggaaccagagacgtcagacagtggatcaatgacaagtgga
cctgtcggtggacgtggaggcatgggtggaggtgcaggtgccaggagcacacggggacct
gcagctagtgctgctgtgcgacccttgcctgccttgaaggagaatgttaagcgggtcatg
ttttattgctag
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