Ricinus communis (castor bean): 8275276
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Entry
8275276 CDS
T01087
Name
(RefSeq) protein argonaute 5 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8275276
03036 Chromosome and associated proteins [BR:
rcu03036
]
8275276
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8275276
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8275276
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8275276
microRNA pathway
RISC loading complex
8275276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Cyclin_D1_bind
GSH_synthase
Motif
Other DBs
NCBI-GeneID:
8275276
NCBI-ProteinID:
XP_002523757
UniProt:
B9SCN8
LinkDB
All DBs
Position
8:15104680..15110831
Genome browser
AA seq
987 aa
AA seq
DB search
MSHRGGGRRQESQRDRQSSATSPSFNRGGGGGRGGRGRGGAGSFYAQPAPPPAGSDFPSL
SRPPTTSSRAAAAPQAAPPSSSSRAPPAPAPAPAPPPAAAASTSTQIEKLTHGVEQLTTT
AGAPTPSSSKEIRFPNRPGYGSIGMKCVVKANHFLVDVADRDLRQYDVSITPELTSKKIN
RDVISQLIRMFRQSHLGNRRAAYDGRKSLYTAGPLPFESKEFVVKLVESNKNAGSSVSSK
KEREFKVAIKFASKPDIHHLKQFLIGRQMDCPQETIQVLDIVLRETPSEKYTPVGRSFFS
PDLGQKGELGDGIEYWRGYYQSLRPTQMGLSLNIDVSARSFYEPIIVTDFVSKYLKLRDM
SRPLSDQDRIKVKKALKSVKVQILHREYAKSYKVTGISNKPLNQIFFKLDDKSTDISVVQ
YFREKYNIGLKYTSLPALQAGSDAKPIYLPMELCKIVDGQRYSKKLNERQVTALLRATCQ
RPHEREESIKQMVKRNSYNQDVLVRDEFGIQVKEELTFVDARVLPAPMLNYHETGRESRV
DPRCGQWNMINKKMVNGGSVNFWTCVNFSLNINRDLPAEFCRQLIQMCVSKGMAFNPNPI
IPISSAHPGQIGKTLNDIKRQCEAKLVKQLQLLIIILPDISGSYGIIKRVCETELGIVSQ
CCQPRQAAKLSKQYFENVALKINVKVGGRNTVLNDAVQRRIPLVTDCPTIIFGADVTHPP
PGEDSSPSIAAVVASMDWPEVTKYRGIVSAQAHREEIIQDLYKSFQDPQGILKHSGMIRE
LFVAFRRETGMKPKRIIFYRDGVSEGQFSQVLLYEMDAIRKACASLEEGYLPPVTFVVVQ
KRHHTRLFPVDRGQTDRSGNILPGTVIDTKICHQREFDFYLNSHAGIQGTSRPTHYHVLY
DENHFTADNLQVLTNNLCYTFARCTRSVSIVPPAYYAHLAAFRARYYIEGEMSDGGSTSG
KSTTGRSKEVQPLPVIKDNVKDVMFYC
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccgtggtggtggccgacgtcaggaatctcagcgcgaccgacaatcctctgct
acatccccgtcgttcaatcgcggaggcggtggtggacgtggcggtagaggccgaggtgga
gctggctccttttacgctcaacctgctcctcctccagcaggatcggactttccttcatta
tctcgtcccccgactacttcatccagagcggctgctgctcctcaagcagcgcctccttct
tcatcttcgagagctccaccggctccggctccggctcctgctcctcctcctgcagcggcg
gcctcaacttccactcagatagagaagctgacgcatggggttgagcagttaacgacgacg
gccggagctcctacaccgtcgtcatcaaaggagattagatttcctaataggccagggtac
ggtagtatagggatgaagtgtgtggttaaagccaaccattttttggttgacgtcgctgat
agagatctccgtcaatacgatgtgagcataactcctgaactaacctcaaagaagataaac
agagatgttatatctcagctcattcgcatgtttcgtcagtcacatttgggtaaccgaaga
gcagcttatgatggtaggaaaagcttatacactgcagggcctttgccttttgagtctaaa
gaatttgttgtcaagcttgttgaatcaaataaaaatgccggttcttctgtttcatccaag
aaggaacgtgaatttaaggtggcaattaaatttgcatctaagcctgatattcatcatttg
aaacaattcttaatcggtagacaaatggattgcccacaagaaacgattcaagttcttgac
attgttcttcgggaaacaccttcagagaagtatacccctgttgggaggtcatttttttca
cctgatttgggccaaaagggagagcttggcgatggtatagagtattggagaggatactat
cagagtcttcgcccaacccagatggggctttctcttaacatagatgtatcagctcgatca
ttctatgagcccattattgtgaccgactttgtttcaaaatacttgaagttgagagacatg
tcaaggcctctctctgatcaagatcgaattaaggtgaaaaaggctctgaaatcagtgaaa
gtgcaaatacttcacagggagtatgctaaaagctataaagttactggcatatccaataaa
cccctgaatcagatattcttcaaattggatgacaagagcacagatatctcagttgtacag
tatttccgtgaaaaatacaatattgggctaaaatatacgtccttgcctgcccttcaagct
gggagtgatgcaaaaccaatttacttgcctatggagctttgtaagattgttgatggtcag
aggtattcaaagaaacttaatgaaagacaagtaactgcactgctaagagcaacctgtcaa
cgccctcatgaacgagaggaaagcattaagcagatggtcaagcggaatagttacaaccaa
gatgtgcttgtaagggatgagtttggaatccaagtgaaagaagaacttacatttgttgat
gcccgagttttgcctgctcccatgcttaattatcatgagactggaagggaatcaagggtt
gatccccgctgtgggcaatggaatatgattaacaagaaaatggtgaatggtgggagtgtg
aatttttggacatgtgtgaacttctctttgaacatcaatcgagatttgcctgctgagttc
tgtaggcaattgattcagatgtgtgtcagcaaaggaatggcattcaatccaaaccctatt
attccaataagctcagctcatccaggtcaaattgggaagactcttaatgatattaagagg
caatgtgaggcaaaacttgtgaaacagctgcagttgctgataattattctacctgatatc
agtggatcttatggaataattaagagagtctgtgaaacagaattgggaattgtttctcag
tgttgccaaccacgacaagcagcaaaactgagtaaacagtattttgagaatgttgctctc
aaaatcaatgttaaggttgggggaagaaacactgtgttgaatgatgccgtgcaaaggagg
atcccacttgtgactgattgccctacaattatttttggtgctgatgtaactcatccacca
ccaggggaggactctagtccgtcgatagcagcagtagtggcttcaatggactggcctgag
gtaaccaagtatagaggcattgtctctgcacaggcgcatcgtgaagaaatcatccaggat
ttgtataaatcctttcaggatcctcagggaatattaaagcattcaggaatgatcagagaa
ttgtttgttgcatttagaagagaaactgggatgaaacctaaaaggattatattctacaga
gatggtgttagtgaggggcagtttagtcaagttttgctgtatgagatggatgccataaga
aaggcttgtgcctcactggaggagggatatcttccaccggttaccttcgttgtggtgcaa
aaaaggcaccatacacgactttttcccgttgatcgtggtcagacagacaggagtggcaat
attctgccaggcactgttattgacactaagatatgccaccagagggagttcgacttctac
ctgaacagccatgctggaattcagggaaccagcagaccaactcattaccatgtgctgtat
gatgaaaatcatttcactgctgataatctgcaagtgctgactaataatctgtgttacacg
tttgccaggtgtacacgctctgtgtccatagtccctcctgcctattatgcccatttagca
gctttccgtgctcgatattacattgagggtgaaatgtcagatggtggatctaccagtgga
aagagcacaacagggcggagtaaggaggtccagcctcttcctgtcatcaaagataatgtg
aaagatgtgatgttttattgctga
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