Ricinus communis (castor bean): 8275363
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Entry
8275363 CDS
T01087
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8275363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8275363
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
8275363
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
8275363
NCBI-ProteinID:
XP_015578180
UniProt:
B9SFB7
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Position
5:30633022..30639734
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AA seq
589 aa
AA seq
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MYRIIKKSRASPESPPDSTRTSQFPDEVLERVLGLLKSNKDRSSVSLVCKDWYNAERWSR
THVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLVPRNWGADIQSWLVVFASKYP
FLEELRLKRMTVNDESLEFLSLNFPNFKALSLLSCDGFSTDGLAAIATHCKNLTELDIQE
NGIDDKSGSWLNCFPGNFTSLEVLNFANLNSEVNFDALERLVSRSKSLKVLKVNKNISLE
QLQRLLACTPQLTELGTGSFSQELTARQFTEVENTFSHCKNLDTLSGLWEAMAPYLPVLY
PACTNLTFLNLSYAALQSLELANLLRHCPQLRRLWVLDTIEDKGLESVGSNCPLLEELRV
FPADPFEEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLC
IMNPRQPDYTTNKPMDEAFGAVVKTCTKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAF
AGSSDWGMQCVLGGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCNVTMNGCRL
LAREMPRLNVEVMKEDGSDDSQADKVYVYRSVAGPRRDAPSTVLNLSGL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaatcataaagaagagcagagcgtcgcccgagtccccacccgattcaactcgg
acatcacaatttccagatgaagtactggagcgggttttgggtttattaaaatcgaacaaa
gaccggagctccgtttctctagtatgcaaagattggtacaacgcagagagatggtcacgc
actcatgtctttattggtaactgttactcagtttctcctgagattgtagctcgccgcttc
ccgaaaatccggagtgttactttaaaagggaagccgagattctctgattttaatttggtt
ccaagaaattggggtgctgatattcagtcttggcttgtggtttttgcttcaaagtatccg
tttctagaagagctcaggcttaaaagaatgaccgtcaatgatgaaagtttggagtttttg
agtcttaatttcccaaactttaaagctttatcacttcttagctgtgatgggtttagtact
gatggacttgctgccattgccactcattgcaagaatttgactgagcttgacatacaggag
aatggcattgatgataaaagtggcagttggttgaactgctttcctggaaacttcacatca
ttggaagtattgaactttgccaacctgaatagtgaggtcaattttgatgcactggagaga
ctggtaagtaggtccaaatcattaaaggttctgaaggtcaacaaaaatatttccttagaa
caactacaaaggctgcttgcttgcaccccacaattaacagagcttggtactggctctttc
tcgcaagagcttactgctcgccagtttactgaggttgaaaatacgttcagccattgcaag
aacctggataccctttctggtttatgggaagcaatggcaccatatctaccagttctatat
cctgcttgtacaaacttgactttcctaaatttgagctatgctgctttacaaagccttgaa
cttgctaatcttcttcgccactgcccacagcttcgtcgtctatgggtactggacactata
gaggacaaagggctggagtctgttggatcaaactgtcctttgcttgaggaactacgtgtc
ttccctgctgacccctttgaggaggaaattatccatggagtgactgaagcaggatttgtt
gctgtgtcttacggttgtcggagacttcactatgttctctatttttgccggcagatgact
aatgctgcagtagcaacaattgtgcaaaattgccccaatttcacccacttccgtctctgc
ataatgaatccacgccaaccagattatactacaaataaaccaatggatgaggcttttggt
gcagttgtgaagacttgcactaaacttcagaggctttcagtttcaggtctcttgactgac
ctgacattcgagtatattggcagatatgccaaaaatttggaaactctttctgttgctttt
gctggcagtagtgactgggggatgcaatgcgtgttgggaggctgtccaaaattgaggaaa
cttgagataagggattgcccatttggaaatgcagcacttctctcaggtttggagaagtat
gaatctatgaggtcactttggatgtcatcgtgcaatgttacgatgaatggctgcaggcta
ttggccagggagatgccacgactgaatgtggaggtgatgaaggaggatggcagcgatgac
agtcaagccgataaagtttatgtttaccgctctgttgcaggaccaagaagagatgcccca
tcgactgtcctcaatctttcaggtttataa
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