Ricinus communis (castor bean): 8275467
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Entry
8275467 CDS
T01087
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04141
Protein processing in endoplasmic reticulum
rcu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8275467
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
8275467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8275467
04131 Membrane trafficking [BR:
rcu04131
]
8275467
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rcu04091
]
8275467
Chaperones and folding catalysts [BR:
rcu03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
8275467
Membrane trafficking [BR:
rcu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
8275467
Autophagy
ER-phagy
Other ER-phagy associated proteins
8275467
Lectins [BR:
rcu04091
]
L-type lectins
8275467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
OAD_gamma
CFAP143
Motif
Other DBs
NCBI-GeneID:
8275467
NCBI-ProteinID:
XP_002511066
UniProt:
B9RA41
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All DBs
Position
4:28575173..28578351
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AA seq
542 aa
AA seq
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MGEAKRISLRLALVFLVAFVSFVQLRADSDDNKIFYESFEDSFEGRWTLSAKDDYKGEWK
HAKSEGHDEYGLLVSEKARKYAIVKELDEPATLKDGTIVLQFETRFQNGLECGGAYLKYL
RPQEAGWTPKDFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKYPPSVPS
DKLTHVYTAILKPDNELRILVDGEEKKKANFLSSDDFEPPLVPAKTIPDPDDKKPEDWDE
RAKIPDPNAVKPDDWDEDAPMEIVDEDAEKPEGWLDDEPEEIDDPDAAKPEDWDDEEDGE
WEAPKIDNPKCETAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPNYFE
LEKPDFEPIAAVGIEIWTMQDGILFGHILIADDEKVAESLRQTAWKPKFDAEKEKQKAED
AAAGSDGLAGFQKKVFDLLYQVADIPFLSEHKDKIIDIIEKGEKQPNLTIGILVSIVVVI
FTVLFKILFGGKKPAKVEEKPAPAAETSKKEESSGEKAEENEKEDAAAAAAPPRRRQARR
EN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcaaaacgcatctctctacgattagctcttgtatttttagtagcttttgtt
tccttcgttcagctacgagcagactctgacgataataagatcttctacgagtcatttgag
gactcatttgaaggacgatggactctgtctgctaaagatgactacaaaggtgagtggaag
cacgcgaagagtgaaggtcatgatgagtatggccttcttgtgagtgaaaaagctaggaag
tatgccattgtgaaagagctcgacgaaccggcaactctcaaggatggaaccattgttctc
caattcgagactcgttttcagaatgggcttgaatgcggtggcgcatatcttaaatatttg
cgtccccaggaagctgggtggactcctaaggattttgacaatgactctccttattctata
atgtttggacctgacaaatgtggggccacaaacaaggtgcacttcattcttaagcacaag
aacccaaagagtggcgagtacattgaacaccatctcaaatatccaccatctgttccatct
gacaaactcacccatgtctatactgccattctgaaacctgacaatgagctgcgaattttg
gttgatggagaagagaagaagaaggcaaattttctctcatctgatgatttcgagcctcct
ttagttcctgccaagacaattcctgatccggatgataagaagcctgaagactgggatgag
cgagccaaaattcctgatcctaatgcagtgaagccagatgattgggacgaggatgcacct
atggaaattgtagatgaggatgctgagaaacctgaaggatggttagatgatgagcctgag
gaaattgatgatcctgatgctgcaaaacctgaagattgggatgatgaggaggatggtgaa
tgggaggcaccaaagattgataacccaaagtgtgagacagcacctggttgtggtgaatgg
aagaggccaatgaaaagaaatccagcttacaaaggaaaatggcatgctccacttattgac
aaccccaactataagggtatctggaagcctcaggagattccaaaccccaactactttgag
cttgaaaagcctgactttgagcccattgctgctgttggcattgagatctggacaatgcag
gacggtattttgtttggacatatcttgatagcagatgatgagaaggttgcagagtcactc
aggcagacagcatggaagccaaagtttgatgctgagaaagagaaacagaaggctgaggat
gcagctgctggttcagatggtcttgctggcttccagaagaaggtgtttgatctgctgtac
caggttgcagatattcctttcttaagcgagcacaaggacaaaattattgatattattgaa
aagggagagaaacagcccaacctcacaattggtatactcgtctccattgtggtggtgatc
tttactgtgctttttaagatcctctttggtgggaagaagcctgcaaaagtagaagagaaa
cctgcaccagctgctgagacttcgaaaaaggaagaaagcagtggagagaaagcggaagag
aacgagaaggaagatgctgcagctgctgctgctccccctcgcagaaggcaagccaggcgc
gagaactaa
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