Ricinus communis (castor bean): 8275495
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Entry
8275495 CDS
T01087
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
8275495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8275495
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
8275495
Membrane trafficking [BR:
rcu04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
8275495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
8275495
NCBI-ProteinID:
XP_002511094
UniProt:
B9RA69
LinkDB
All DBs
Position
4:complement(28425158..28438893)
Genome browser
AA seq
1012 aa
AA seq
DB search
MVIQACFLIVLSSIFCLSVESKYMVYNTTASIVPGKINVHLVPHTHDDVGWLKTMDQYYV
GSNNSIQGACVQNILDSLVPALLADKNRKFIYVEQAFFQRWWNEQSEEVQKIVKKLVSSG
QLELINGGMCMHDEAATHYIDMIDQTTLGHKFIKQEFNLTPRIGWQIDPFGHSAVQGYLL
GAEVGFDSIFFARIDYQDRSKRKDEKSLEVVWRGSKSLGSSAQIFAGAFPKNYEPPSDNF
YFEVNDESPIVQDDINLFDYNVPDRVNDFVSAAMSQANITRTNHIMWTMGTDFKYQYAHS
WFKQMDKFIHYVNQDGRVNAFYSTPSIYTDAKYAANESWPLKTDDYFPYADDVNAYWTGY
FTSRPAIKGYVRTISGYYLAARQLEFLKGRSKAGSNTDSLANALAVAQHHDAVTGTEKQH
VADDYAKRLSIGYKEAEKVVGESLSCIAESKLETDCTNTTNKFQQCPLLNISYCPASEVD
LSNGKSLVVVVYNSLGWKRENVIRVPVINENVNVKDSEGNEIESQLLPLLDASISVRNYH
SMAYLGSSPNVTPKYWLAFSVSVPPLGFSTYIIASAPPTAKRTAAFSEAQTVHKTRATQY
GTIEIGPGNLKLIYSGKDGKIAQYINRRTSVKKSVEQSYSYYAGDDGSKDLQASGAYIFR
PNGTYPINSKGQVAFTVLRGPLLDEIHHRINSWIYQITRVYKGKEHAEVEFTVGPIPIDD
GIGKEVVTKITTTLKNNKTFYTDSSGRDFLERIRDYRKDWDLQVNQPVAGNYYPINLGIY
MKDNSSELSILVDRSVGGSSIVDGQLELMLHRRLVIDDSRGVGEALNETVCVLDKCTGLT
IVGKYYLRIDPLSEGAKWRRSYGQEIYSPFLLAFAEQDRESWTKSHVTTFSAMGSSYVLP
DNVAILTLQELDNGKTLIRFAHLYEIGEDEDMSIMASVELKKVFPSKKINKVTETSLTAN
QERAEMDRKRLVWNAEGFSGDENKVARGAPIDPVKLVVELAPMEIRTFLVDF
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggtgattcaagcatgtttcttgattgtattgtcgagcattttctgcttgagcgtggaa
tccaagtatatggtttataatactacagcaagcattgtccctgggaagatcaatgttcac
ttggtgcctcacacgcatgatgatgttggatggttaaagactatggatcagtattatgtt
ggatctaacaattccattcagggagcatgtgtgcagaatatattggattctttagtgcct
gcattgctggcagacaagaatcgcaagttcatatatgttgaacaggcatttttccagcgt
tggtggaacgagcagagtgaggaggttcaaaaaatagtcaagaagcttgtcagttcgggt
caacttgagttaataaatggaggcatgtgtatgcatgatgaggcagctacacattacatt
gacatgattgatcaaacaactttaggacataagtttataaaacaagagtttaatttgaca
ccgagaattggctggcagattgatccatttggacattctgcagttcagggttatctgttg
ggagcagaggttgggtttgactctatcttttttgcacgaatcgactatcaagacaggtct
aaacggaaggatgagaagagtcttgaggttgtctggcgtggctctaaaagtctaggttca
tctgcacagatatttgcaggtgcatttcctaagaattatgaacctccaagtgacaacttc
tactttgaagttaatgatgagtcccccattgtccaggatgacatcaatttgttcgactat
aatgtacctgatcgtgtgaatgactttgtatcggctgcaatgtctcaagctaacataact
cgaacaaatcatattatgtggactatggggacagatttcaagtaccagtatgctcactcg
tggtttaagcagatggacaagtttatacattatgtgaatcaagatgggcgtgtgaatgcc
ttctactcaacgccatcaatatataccgatgcaaaatatgcagcaaatgaatcctggcct
ctcaaaactgatgactattttccatatgcagatgatgttaatgcttactggactggatat
tttacgagtagacctgccatcaaaggctatgttagaacaataagtggctactatttggca
gcaagacaactggagttccttaaaggaaggagtaaagcaggatcaaacacagattctctt
gctaatgcgttagcagttgctcaacaccatgatgcagttactggcacggagaagcagcat
gtggctgatgattatgcaaaacggctgtcaataggatacaaggaggctgagaaggttgtt
ggagaatcattgtcctgcatagcagagtcaaaactagaaactgattgcacaaacacaaca
aacaagtttcaacagtgtcccctgctgaatataagttactgtccggcatcagaagttgat
ctgtcaaatgggaaaagtctggtggtggttgtctacaattctctgggatggaaaagagag
aatgttataagagttcctgtgattaatgaaaatgtcaatgtcaaggattctgaaggaaat
gaaattgaatcacagcttttgcctctgctggatgcctctataagcgtaagaaactaccac
tctatggcatatttgggtagctctccaaatgtgacccccaagtactggctagcattttca
gtatctgtaccacctcttggtttcagcacctacataatcgctagtgcccccccaactgcc
aaaaggacagctgctttttcagaagcacaaacagtacacaagacaagagcgactcaatat
gggacaattgaaatagggcctgggaacttaaaactaatatactcggggaaagatggaaaa
attgctcagtatataaataggagaacctcggtcaaaaaatcagtggagcaatcatacagc
tattatgctggagatgatggaagcaaggatcttcaggcctctggagcatacatcttccgg
ccaaatggtacatatcccatcaactcaaaagggcaggttgcttttactgttttacgagga
cctttactggatgaaattcatcacaggatcaactcatggatatatcaaataacccgagtt
tacaagggaaaagaacatgccgaagttgagtttactgttgggccaataccaattgatgac
gggattggcaaggaggtagtaactaagatcacaacaactctaaagaacaacaaaacattc
tatacagattcaagcgggcgcgatttcctagaaaggattcgagactacaggaaagactgg
gacctccaagtgaatcaacctgttgcaggaaattattatccaattaaccttggaatttat
atgaaagataatagttcagagctctccatcttagttgaccgatctgttgggggatcaagt
attgtggatgggcaattggaactgatgctccacagaagattagttatagatgactccaga
ggagttggagaggcactgaatgaaacagtttgtgttcttgacaaatgcacaggattgact
attgtagggaagtactacttaagaatagatcctttaagtgagggtgctaagtggcgtcga
tcatatggtcaggagatatattctcccttcctcctagcttttgcagagcaggatagagag
agttggacaaagtctcatgtaacaaccttttctgctatgggttcctcctatgttttacca
gataacgttgcaatattaaccctccaggaactggacaatgggaaaactctaattcgattc
gcacacttatatgagattggagaggatgaggatatgtcaatcatggccagtgtagaactg
aaaaaggtgtttccaagcaagaagataaacaaagtaacagagacaagcttgactgctaat
caagaaagggcagaaatggacaggaagaggctagtttggaacgcagaaggcttttctgga
gacgaaaacaaggtggcgcggggagcacctatagatccagtgaaactagttgttgaactt
gctccaatggagatccgcactttcctcgtagacttttga
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