Ricinus communis (castor bean): 8275530
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Entry
8275530 CDS
T01087
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00061
Fatty acid biosynthesis
rcu00071
Fatty acid degradation
rcu01100
Metabolic pathways
rcu01212
Fatty acid metabolism
rcu04146
Peroxisome
Module
rcu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8275530
00071 Fatty acid degradation
8275530
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8275530
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcu01004
]
8275530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8275530
Enzymes [BR:
rcu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8275530
Lipid biosynthesis proteins [BR:
rcu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8275530
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of breast milk
8275530
Exosomal proteins of breast cancer cells
8275530
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8275530
NCBI-ProteinID:
XP_048231096
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Position
5:complement(12300358..12305355)
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AA seq
662 aa
AA seq
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MSMEYLVKVEESRPAASDGKPSAGPVFRSIYAKDGLLEVSAELDSPWQFLSDSALKNPNN
RMLGRRLVTDSKVAGPYVWLTYKEVYETAIRIGSAMRSRGLNPGDRCGIYGSNCPEWITA
MEACKSHAITFVPLYDTLGPNAVEFIVNHAEVSLAFVQESKLSSILACLPKCSSYLKTIV
SFGSVSAMQKKEAEELGASCFSWEEFCQLGSLDCELPAKHKGDICTIMYTSGTTGEPKGV
LLTNGAIMAEVLSVDHLLFLTDRAATEEDSYFSFLPLAHVYDQVIETYCIQKGASIGFWR
GDVRFLLEDAQALKPSIFCGVPRVYDRIYTGTMQKISSGGALRKKLFDFAYSYKLGNLQK
GLPQAQAAPLLDRLVFEKTKQTLGGRVRIMLSGAAPLPKHVEEFLRVTSCSTLSQGYGLT
ESCGGCLTSIGDVFPMVGTVGVPMTTIEVRLESVPEMGYDALSSVPRGEICLRGNTLFSG
YHKREDLTKEVLIDGWFHTGDIGELQPNGAMKIIDRKKNIFKLSQGEYVAVESLENTYSR
CSLIASIWIYGNSFESCLVAVVVPERQALEDWAANHNVADDFKTLCKNLKARKYILDELN
STGLKHKLRGFEMLKAIHLEPHLFDMDRDLITPTFKLKRPQLLKYYKDCIDQLYSEAKGL
KA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggaatatctagtgaaggttgaagaatcaaggcctgctgctagtgatggaaaa
ccatcagctggacctgtttttaggtccatttatgccaaagatggtcttcttgaggtgtct
gcagaactggattctccttggcaattcttgagcgattctgctcttaagaacccaaataac
cgaatgctaggcagacgtctagtcacagattcaaaggtggcaggtccttatgtatggctg
acttataaagaggtttatgaaactgcaatcagaataggttcagcaatgagaagccgtggt
ctgaatcctggggatcgttgcggtatatatggttccaactgcccagaatggattactgca
atggaggcttgtaaaagtcatgcaattacatttgtaccattatatgacactcttggtcct
aatgccgtggaattcatcgtcaatcatgctgaagtatcactagcttttgttcaagagagc
aagctctcttctatcctagcttgcctcccaaaatgctcatcatatttaaagactattgtt
agctttgggagtgtttctgccatgcaaaagaaggaagctgaggaattgggtgcatcctgc
ttttcatgggaagaattttgtcagttgggaagtttggattgtgaattacctgcgaaacat
aagggtgatatctgcacaataatgtatacaagtggaacaacaggagaaccaaaaggtgtt
cttcttactaatggggctataatggcggaagtattatccgtcgaccatctactttttctt
acagatagagcggctacagaagaggattcatacttctctttccttcctttagcccatgta
tatgatcaagtaattgagacctattgtatccaaaaaggtgcttctataggattttggaga
ggggatgtcaggtttttgcttgaggatgctcaggcgttgaagcctagtattttctgtggg
gttcccagagtctatgaccgcatatacactggaacaatgcaaaaaatttcatctggaggt
gctttaaggaagaaactgtttgatttcgcctatagctacaagctaggaaatcttcagaag
ggattgccacaagcccaggcagcacctcttttggacaggcttgtcttcgaaaagacaaaa
caaacattgggaggtcgagttcgcatcatgttatctggtgctgcacctttgcctaagcat
gtggaggagtttttgagagtgacttcctgctctactttatcacaaggatatggtctgaca
gaaagttgtggaggttgtttaacatccataggtgatgtgtttcctatggttggaaccgtt
ggagttcccatgacaaccattgaagtaaggcttgaatcagtgcctgaaatgggatatgat
gcattatccagcgttccaaggggagagatttgcctaaggggaaataccttattctccggt
taccacaagcgagaagatctaacgaaagaagtcctcattgatgggtggtttcatacaggt
gacattggagaattacaaccaaatggagcaatgaagatcattgacaggaaaaagaacata
ttcaaactatcccaaggtgaatatgttgctgtggagagcctcgaaaatacatattcccgg
tgctctcttatagcttcgatttggatatacggcaacagttttgagtcatgtcttgttgcc
gtagtagtacctgagagacaggcacttgaggattgggcagcaaaccataatgtggccgat
gattttaaaactttgtgcaagaatctgaaggctaggaaatacattttagatgagctcaat
agcactggcctgaaacacaaacttcgaggatttgagatgttaaaagcaattcatttggaa
ccacatctgtttgacatggacagggatctgataactccaacatttaagctgaagaggcca
caattactcaaatactacaaggactgcatcgatcaactgtacagtgaagcaaagggattg
aaggcataa
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