Ricinus communis (castor bean): 8275559
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Entry
8275559 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8275559
KO
K17925
sorting nexin-13
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rcu04990
]
8275559
Domain-containing proteins not elsewhere classified [BR:
rcu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
8275559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
8275559
NCBI-ProteinID:
XP_015574610
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All DBs
Position
5:12158953..12170019
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AA seq
1055 aa
AA seq
DB search
MKAMETIQDLIEEAKVRTVWWFLCIFAVTYFLSHTSSSMWLNLPVSILLISALRILSNEV
EISWKPRKLNRPQSYLSHLEKKQLSVNDSRISSAPLPPKWKRKIDSLIVEAAINDLIDKV
LKDFVVDLWYSEITPDKEAPELMRSVIMDAIGEISGRVKEINLVDLLTRDMVDLIGDHLD
LFRRNQAAVGTDVMATLSTDERDERLKHHLMASKELHPALISPESEYKVLQRLIGGVLAV
VLRPRESQCPLVRTIARELVTCLILQPVMNLASPVYVNEIIEFVLLAIKDGSLMEVSGDP
SAGDAHNGDFSSGRSSSLNSQKTNIVDKRKNFQGTDMTLARINGRKETSLDYESNQQEPM
QPRYGDWARVLEAATQRRTEVLTPENLENMWTKGRNYKKKETKSLKVGVTLARGSAINNA
EPAINVGKDALTNSTIISTGAEEKATVRLTPESSHETLLSDENKSGRHFTEEHNEVFSFD
GAHAGDEFNSPNNPLINENKSRLKRSNSTSALKVQSVEKKAFTGDGKGSIISEFYSPNIG
RHIEDNAVEKISDIVFHGGGPHVPSPKLKCRVMGAYFEKIGSKSFAVYSIAVADAENRTW
FVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDRYLQDLLSIAN
VAEQHEVWDFLSVSSKNYSFGKSASVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGSP
FPLDDADSSIYSTNTSWHADEMSNNVMRQDTSETANSFSDNEESLKQESHGQEEGSSEQG
NSWHSDNELNSKGVPPQVIKRDEESQTSDAKCKQGLETTSERFNQGGFFTANSAATISTH
MEDPIGMPPEWTPPNVSVPLLNLVDKVFQLKRRGWLRRQVFWMSKQILQLIMEDAIDDWL
LRQIHWLRREDIVAQGIRWVQNALWPNGTFFTRVGATEGKVDDAQVHLIPLQVSQFGGSK
VSKQGSGSFEEQLEAARRASDIKKMLFDGAPTALVSLIGNKQYKRCARDIFYFTQSTICV
KQLAYAILELLLVSVFPELQDLVLDIHGKMGVLPS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgatggagacgattcaggatctaattgaggaggctaaagtacggacggtgtgg
tggtttttgtgtatctttgccgttacttacttcttatctcatacgagctcatcaatgtgg
ctaaatctacctgtatccattcttttgatttctgcattacgaattttgtctaatgaggtg
gagatcagctggaaaccacgcaagctgaaccgtcctcagtcgtatttgtctcatttggag
aagaagcaattgtctgtgaatgattcaagaatttcttctgcaccccttccaccgaagtgg
aaacgaaaaattgattcgctgatcgttgaggctgcaattaatgatcttattgataaagtc
ttgaaggattttgtagtggacctgtggtattcagaaattacgccggacaaggaggcacct
gaactaatgcggtcagtgattatggatgctattggtgagatatcaggaagagttaaggaa
attaaccttgttgacttgctaacaagggatatggttgatttaataggggatcacttggat
ctatttagacgaaatcaagccgcagtaggcactgatgtaatggcgacactttccacggat
gagagggatgaaaggttgaagcaccatctaatggcttccaaggagcttcatcctgcactc
atatctcctgagagtgagtacaaggtacttcagcgcctaattggtggagttttagctgta
gtgctaagacctcgagagtctcaatgccccctggttcgaacaattgcacgagagcttgta
acttgcttgatattgcagcctgttatgaatcttgcaagccctgtgtatgtcaatgagatc
attgaatttgttttgcttgccattaaagatggtagcttaatggaggtaagtggtgatccg
tctgctggggatgcacataatggtgatttttcctcgggaagaagttcttccttaaatagt
caaaagacaaatattgttgacaaaagaaagaactttcaagggactgacatgacattggct
agaatcaatggtcgtaaagaaacatccttggattatgagtcaaaccagcaagagcctatg
cagccacgttatggagattgggcaagggtgctagaggcagctactcagagaagaactgag
gttctcacacctgaaaatcttgaaaacatgtggacaaaaggaagaaattataaaaagaaa
gagaccaaaagtcttaaagtaggggttactctggcaaggggttctgcaataaataatgct
gaacctgctataaatgtagggaaggacgctttaacaaacagcaccataatttctacagga
gcagaggagaaagcaacagtgcggctaacgcctgaatcaagtcatgaaactctattaagt
gacgaaaataaaagtgggagacattttaccgaggaacacaatgaggtgttttcttttgat
ggagcacatgctggtgatgaatttaacagccctaataatccattgattaatgaaaataag
agtaggcttaagagatccaatagcacttctgctctgaaagttcagtctgttgaaaaaaaa
gcatttacaggagatggcaaaggatccattatttctgagttctatagcccaaatattggc
aggcatattgaagataatgctgttgagaagatctcagacatagtattccatggtgggggc
cctcatgttcctagtcctaagctgaagtgccgggttatgggagcatactttgagaaaatt
gggtcaaaatcttttgcagtctattcaattgcagttgctgatgcagaaaataggacttgg
tttgtgaaaagaagatacaggaattttgagagattgcatcgacatctcaaggacattccg
aattacacattacacttgcctcctaaaaggatattttcgtcaagcacagaggatgcattt
gttcatcaacgatgcattcagcttgatagatatttgcaagatcttttgtctatagctaat
gttgctgaacagcatgaagtgtgggatttcttaagcgtctcctcaaagaattattctttt
ggaaaatctgcctcagtgatgagaactttggcagtcaatgtggatgatgctgtggatgat
attgttcgccaatttaaaggggtttcggatggcttaatgcgcaaagttgttggttcgcct
ttcccccttgacgacgccgattcttcaatatacagcacgaatacatcttggcatgcagat
gagatgagtaataatgtgatgaggcaagatacatcagaaaccgcaaacagcttttctgat
aatgaagaaagtctgaagcaagaaagccatgggcaggaggaaggatccagtgagcaaggt
aatagttggcattctgataatgagttaaactcaaagggggttccacctcaagtgattaag
cgtgatgaggagtcccagacctcagatgcaaagtgcaaacaaggtcttgagacaacatct
gagcggtttaaccagggagggttttttacagcaaattctgcggcaacaatctccactcat
atggaggatccaattggaatgccacctgagtggacaccacctaatgtaagtgtacctttg
ttaaatctagtggataaggtcttccagcttaagagaagaggctggctgagaagacaggta
ttttggatgtcaaagcagatactacagttgataatggaagatgctattgatgattggctc
ttgaggcagattcactggcttcggagagaggatatagttgctcaagggattcggtgggtg
caaaatgctctctggccgaatggtacattctttacaagagtaggggctacagaaggcaaa
gttgatgatgctcaagtgcatttgattcccctccaagttagccaatttggtggcagtaag
gtctctaaacaaggttccggttcctttgaggagcagcttgaggctgctcgtagagcaagt
gatattaaaaagatgctgtttgatggagctccaacagccttggttagcttgattgggaac
aagcagtacaaacgttgtgcaagagacattttctatttcacacagtctaccatctgtgtg
aagcaacttgcatatgcaatacttgagctattgcttgtctcggtttttccggagctccaa
gatcttgtgctggatattcatgggaagatgggcgttttgccttcctaa
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