Ricinus communis (castor bean): 8275616
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Entry
8275616 CDS
T01087
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8275616
03041 Spliceosome [BR:
rcu03041
]
8275616
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
8275616
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8275616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
8275616
NCBI-ProteinID:
XP_015573099
LinkDB
All DBs
Position
3:complement(30295584..30301524)
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AA seq
681 aa
AA seq
DB search
MADESQYSSAADATATTTNKRKYDDQTPPPPSTRRATGFSSPDSAHAHAPPTYNSVPPPV
DEIQMAKQKAQEIAARLLSGAAGGGGDIKRPRVDNNGASGFDSNDNNKGFSSAPPNDLKS
LSNSAPSAIPVSYGTYLGSSSKKIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMD
ADPNSPTRMVELMGNPDQIAKAEQLISEVLAEADVGGSGTVSRRFTGQGGSEHFVMKIPN
NKVGLVIGKGGDSIKNMQARTGARIQVIPLHLPPGDTSTDRNVHIEGTSEQIELAKQLVN
EAISENRARNPSMAGGYPQQGYQSRPPSWGQPGAPQIQQPGYGYMQPGAYPGQSQQYNMS
QPPYGGYPPQPSSGGYASNWDQSNPTANQQTGQGYDYYNQQASQQQPTAGGPAAPADNTG
YNYSQPPASGYNQQGQGYGQDGYGGYPQSGYGQAPQYDQQQGYASTYGNVANATQEGHTP
SYGVQGDSTQAPSQQGYTSGQQPSPNPASYPPQGSTQPGYGIPPTSQSGYGSQPQAQPGY
GSSYGPPQAQKPPANPPVYGQTQQSPSTPGGYAQPASVQSGYPHSQPPPSSYTQADSGPQ
RASGYGATGAQPGYGPPYGSTPGGQSGYGQGIPPYNTSYASGYSQQPAVYPTDGSGSNNA
RATYDAAPAAQPAQAKTSPQS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaatctcagtactcttcggccgcggatgccaccgccaccactacaaacaag
cgcaaatacgacgaccaaacaccgccgccaccatcaactcgccgcgctaccggcttttca
tcgcctgactcagctcatgctcatgctccgcctacttacaacagcgtcccaccacctgtt
gatgagatccagatggctaagcaaaaagctcaggagattgccgctcgcctcttgagtgga
gcagctggtggtggtggtgatattaaacgccctagggttgataataatggtgcttctggt
tttgattctaatgataataataagggctttagctctgctcctcctaatgatttgaagtct
ctgtcaaattcagccccttctgctattcctgtttcatatggcacatacttgggaagctcg
agcaagaagattgaaattccaaatggtagggttggtgttattattgggaaaggtggagaa
actatcaaatacctgcagattcagtctggagcgaagatacaggttacaagagacatggat
gcagaccctaattctccaacaaggatggtagagcttatgggcaaccctgaccaaattgca
aaggctgagcagttgataagtgaagttcttgcagaggctgatgtagggggttctggtaca
gtttcccgaaggtttacaggacaaggaggttctgaacattttgtaatgaaaattcctaat
aacaaggttggactggtaattggtaaaggaggtgactcgattaagaacatgcaagcaaga
actggagctcgtattcaggtgatacctttgcatctacccccaggtgatacatcaacagat
aggaatgtgcatatagagggtactagtgaacagattgaacttgcaaaacagttggttaat
gaagctattagtgagaatcgtgcaaggaatccatcaatggctggaggatatcctcaacaa
ggatatcaatcgcggccaccaagctggggtcagcctggagctcctcaaattcagcaacct
ggttatggctacatgcagcctggagcctaccctggccaatctcaacagtataatatgtct
caaccaccttatggagggtatcctccccaaccatcatctggtggatatgcatccaactgg
gatcagtcaaatcccactgccaatcagcaaaccggtcagggttatgactattataatcag
caagcttcacagcaacaaccgactgctggtggtcctgcagctccagcagataatacaggt
tataattatagtcagccaccagcttctggttataatcaacaaggacagggttatggtcag
gatggctatggtgggtatcctcaatctggttatggtcaagcaccacaatatgatcaacag
caaggctatgcttcaacttatggtaatgttgccaatgcaactcaagaagggcatactccc
tcatacggggtccaaggagactccactcaagcaccgagtcagcaaggttatacttctggg
caacagcctagcccaaatccagcaagttatcctccacaaggatctacccagcctggatat
ggaatcccccctacctctcagagtggctatgggagtcaaccccaagcacagcctggatat
gggtctagctatggacctcctcaagcacagaaacctccagccaatccccctgtttatgga
cagacacaacaatcaccgagcactcctggcggatatgcccaacctgcttctgtgcagtcc
ggatatccacattctcagccaccaccatctagctatactcaagcagattcaggtccacag
cgggcttctggttatggtgcaacaggtgctcagccagggtatggtccaccttatggttct
actccaggtggtcaatcaggttatgggcaggggataccaccttacaacacttcttatgct
agtggttattctcagcagcctgcagtatacccaactgatggcagtggtagcaataatgct
cgggcgacttatgatgcagcaccagcagcgcagcctgcacaagcaaaaacatcaccacaa
agttga
DBGET
integrated database retrieval system
