Ricinus communis (castor bean): 8275642
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Entry
8275642 CDS
T01087
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8275642
Transcription machinery [BR:
rcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
8275642
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
8275642
NCBI-ProteinID:
XP_002516489
UniProt:
B9RRX0
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Position
3:30450793..30455358
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AA seq
560 aa
AA seq
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MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAHR
DPLKTYAYSYAVQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDIFVSPSSTKE
RTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLEV
SDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSRPIQ
SGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSC
WAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVL
EGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTS
NGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEE
VVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKR
VMTRLRNEETCRNLRHYINS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcggctttaggctaaatctcaagttggattttccttttcattctcctaattca
ccttccaggctctcttcatcaccatcatcatcttttgttagaggcagggaggctactagc
tatcagtcaagattgtcttttctgtctgttatatctgaagagggtgacattgctcataga
gatcctttaaagacatatgcttattcatatgcggtgcaaaccgtagagaatgagcattca
caaggggagggatttaaggtgaattttggcaagagatctcactttggcttaaatataatt
ggtgatgctgaagtgtctcttaaagaggacatttttgtctcaccttcaagcacaaaagag
aggacttcgcgctttagtttgttattggaaaatctcaatatcttagagcagtcatttgct
gattcagatgcatcgaagttggaagaggacattctgctacaattaggaaagcttggagct
ctaaaactattcaatacatgccttacaagaactcttgaaaccacaaatgttttggaagtg
tcagatgttcatactgaaattattggagaatgtaatataaatggcacgtcaattaataat
cagattaaagttgttgtccacactgcaaaaaaggaagaaagaaaatctagaagagaaaga
gcctcggcaagaaaaggccataaatctccttctctgccattgccttccagacccattcaa
agtggttctgaaaagcctaccgtttcttctggcaagaaagcatcaaaatcaaagagtagg
agattgataattgctcgaaatgaggcagaaatggcaaggggaatcaaggtgcttgcagac
ttggaaaagatccgaactactttggaagaggaaactgagcgagtagtcagcttgagctgc
tgggctgaagcagctgggcttgacgtgaaggtactgcagcagcagttgagttttggttgg
tattgcagggatgagctcattaagagcactcgctccttagttctatactttgccagaaat
tataggggtacgggaatagccttggaagatttgcttcaggctggaaatctgggagtcctg
gaaggtgcagaaagatttgatcacacaaggggatacagattctcaacatatgtacagtac
tggatacggaaatcaatgtcaaagattgtgtcgcgacttgctagagggatccaaattcct
tgcacattaagccgtgcaatatatcagatacaaaaagctcgaaaagccttaaccaccagc
aatgggaaatacccagatgacgatgaaattgctaagtacacaggtctttctttggctaag
atcgaatcagctagccgatgccttagagttgtgggttcaattgatcagaaaattggagag
tctctcaatgcaaagtatttggaatttctcccagatacctcggttcagagccctgaagaa
gttgtcatgaggcaacacatgatacaagacatgcacaatcttttaagaagcttggattca
agagaaaggcaagtgttaattcttagatttgggctcaatgattatcaacccaaatcactt
gaggagattgggaggcatttccatgtgagcaaagagtgggtaaggaggttagagaagaga
gttatgacgagacttaggaacgaagaaacatgcagaaacttaagacattatataaattca
tag
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