KEGG   Ricinus communis (castor bean): 8275642
Entry
8275642           CDS       T01087                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8275642
Transcription machinery [BR:rcu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     8275642
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-GeneID: 8275642
NCBI-ProteinID: XP_002516489
UniProt: B9RRX0
LinkDB
Position
3:30450793..30455358
AA seq 560 aa
MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAHR
DPLKTYAYSYAVQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDIFVSPSSTKE
RTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLEV
SDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSRPIQ
SGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSC
WAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVL
EGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTS
NGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEE
VVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKR
VMTRLRNEETCRNLRHYINS
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgggcttcggctttaggctaaatctcaagttggattttccttttcattctcctaattca
ccttccaggctctcttcatcaccatcatcatcttttgttagaggcagggaggctactagc
tatcagtcaagattgtcttttctgtctgttatatctgaagagggtgacattgctcataga
gatcctttaaagacatatgcttattcatatgcggtgcaaaccgtagagaatgagcattca
caaggggagggatttaaggtgaattttggcaagagatctcactttggcttaaatataatt
ggtgatgctgaagtgtctcttaaagaggacatttttgtctcaccttcaagcacaaaagag
aggacttcgcgctttagtttgttattggaaaatctcaatatcttagagcagtcatttgct
gattcagatgcatcgaagttggaagaggacattctgctacaattaggaaagcttggagct
ctaaaactattcaatacatgccttacaagaactcttgaaaccacaaatgttttggaagtg
tcagatgttcatactgaaattattggagaatgtaatataaatggcacgtcaattaataat
cagattaaagttgttgtccacactgcaaaaaaggaagaaagaaaatctagaagagaaaga
gcctcggcaagaaaaggccataaatctccttctctgccattgccttccagacccattcaa
agtggttctgaaaagcctaccgtttcttctggcaagaaagcatcaaaatcaaagagtagg
agattgataattgctcgaaatgaggcagaaatggcaaggggaatcaaggtgcttgcagac
ttggaaaagatccgaactactttggaagaggaaactgagcgagtagtcagcttgagctgc
tgggctgaagcagctgggcttgacgtgaaggtactgcagcagcagttgagttttggttgg
tattgcagggatgagctcattaagagcactcgctccttagttctatactttgccagaaat
tataggggtacgggaatagccttggaagatttgcttcaggctggaaatctgggagtcctg
gaaggtgcagaaagatttgatcacacaaggggatacagattctcaacatatgtacagtac
tggatacggaaatcaatgtcaaagattgtgtcgcgacttgctagagggatccaaattcct
tgcacattaagccgtgcaatatatcagatacaaaaagctcgaaaagccttaaccaccagc
aatgggaaatacccagatgacgatgaaattgctaagtacacaggtctttctttggctaag
atcgaatcagctagccgatgccttagagttgtgggttcaattgatcagaaaattggagag
tctctcaatgcaaagtatttggaatttctcccagatacctcggttcagagccctgaagaa
gttgtcatgaggcaacacatgatacaagacatgcacaatcttttaagaagcttggattca
agagaaaggcaagtgttaattcttagatttgggctcaatgattatcaacccaaatcactt
gaggagattgggaggcatttccatgtgagcaaagagtgggtaaggaggttagagaagaga
gttatgacgagacttaggaacgaagaaacatgcagaaacttaagacattatataaattca
tag

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