Ricinus communis (castor bean): 8275693
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Entry
8275693 CDS
T01087
Name
(RefSeq) trafficking protein particle complex subunit 11 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8275693
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
8275693
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Imm65
Gryzun
DUF1444
Gryzun-like
Motif
Other DBs
NCBI-GeneID:
8275693
NCBI-ProteinID:
XP_002532487
UniProt:
B9T2L8
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Position
5:complement(2733222..2740075)
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AA seq
1183 aa
AA seq
DB search
MEEYPEELRTPPVSLIALVGCGEHHPVISTHLLAEQPPMNTLALPDLSKISLLLNSFSDR
NLPPTAGGIIKRDWLLKHRTKVPSVVASLFTSDHVSGDPAQWLQLCSDLEDLKTLIRPKS
IKLVVIVVHSSPVDDINEDRINALRKRAELDSKSLILFNPADSVRLKQSLNKLGSIFAEL
ANTYYRDEGRRIKTRVEKKSFNSHELNIRYCFKVAVYAEFRRDWAEALKFYEDAYHILRE
MVATTNRLPVIQRLVEIKTVAEQLHFKISTLLLHGGKVIEAITWFRQHIASYKKLLGAAE
VIFLHWEWMSRQFLVFAELLETSSKALTSPTSPTLATADRSLTEWEFQPAYYYQLAGHYL
KEKRTSLELALSMLQTADETDGRAESVEPSIYVGQFARLVEQGDAFSMQPLADEEYTYYA
ISEGKRFQDSFEIIALLKRSYDSYINLKAQRMASLCGFQMAREYFSVGDLKNAKFFFDSV
AVLYRQEGWVTLLWEVLGFLRECSRKCGIVEEFIEYSLEMAALPISSGTGIQSFRSKEFG
PAGPASLEQKEIIHKEVFQLVNGETGLMSVDDNGILHVNRDNPLHLEIDLVSPLRMVLLA
SVAFHEQIIKPGVPTLLTLSLLSQLPVTIDIDQVEVQFNQSDCNFIILNSQKPPSAAMSI
GLQGRRTETAPSLALVTNKWLRLTYAITSEQSGKLECIYVVAKMGPHFTICCRAENPASM
DDLPLWKFEDRVETFPIKDPALAFSGQKVAQVEEPDPQVDLILGATGPALVGECFVIPVT
VASKGHSVFSGELKINLVDVRGGGLFSPREAEPFSMDSHHVELLGVSGPEGEGESQTGPD
KIIKIQQSFGLISVPFLQDGESWSCKLEIKWHRPKPIMLFVSLGYFPDNNEMTSQKVHVH
KSLQIEGKNALLISHQFMLPFRQDPLLLSKLKPNPNSDQSASLPLNETSVLVVSAKNCSE
VPLQLQSMSIEVDDDTERLFSLQHSGEDLLGPACLVPGEEFKKVFTVIPEVESSNVNLGS
VSLKWRRDSQNKDQLHSATEAWVSTRHKLPDVNVELSPLVLIVECPPYAILGDPFTYSVK
IRNQTPLLQELNFSLADVQSFVLAGSHSDTVFVLPKSEHLLGYKIVPLASGLQQLPRVTV
TSVRYSAGFQPSTAAATVFVFPSKPCVDMADMGDREIESLVAE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtatccggaggagttgagaacaccgccggtgagtctgatagcgttggtagga
tgtggagagcatcatccggtaatctcaacgcatctgttggcggagcagcctccaatgaac
acactagctttgcccgacttgtctaagatctctctccttttgaactctttttccgataga
aatcttcctcctactgccggtggtattattaagagagactggcttcttaagcaccgcact
aaggttccttccgtcgtcgcttctctatttacctccgatcatgtctctggtgatcccgct
cagtggcttcagctctgctccgaccttgaggatctcaaaaccttgattcgtcctaagagc
atcaaattggttgtcattgttgttcattcttctcccgttgatgatatcaatgaagaccga
ataaatgcactccgcaagcgtgctgaattggactctaaatcccttattctcttcaaccct
gctgattctgtacgccttaaacaatctctcaacaagctgggcagcatatttgctgaatta
gctaatacttattacagagatgaaggtcgcaggattaaaacacgcgttgaaaagaagagt
ttcaattctcatgagttgaatattcgttattgcttcaaagttgctgtgtatgcagaattc
cggagagactgggctgaagctttgaaattttatgaggatgcatatcatatactgcgtgag
atggttgccaccacgaataggttgccagtcattcagcgcttggttgagataaaaactgtt
gctgagcaacttcatttcaaaatatcaactttattgttacatggcggaaaggttatagaa
gccattacatggttccgtcaacacattgcttcttacaagaagcttttaggagcagcagaa
gttatttttcttcactgggaatggatgagcagacagtttttggtatttgctgaattgctt
gagaccagttcgaaagcccttactagccctactagtccaactttagccactgcagacagg
tctttgactgaatgggaatttcagccagcttattactatcagttagctggtcactaccta
aaggagaagagaacatctttggaacttgcactgtcaatgttacaaactgctgatgagact
gacggtagagctgaatctgtggaaccttcaatttatgtgggtcagtttgctcggttagtt
gagcaaggggatgcattttctatgcaacctcttgctgatgaagagtacacttattatgct
atttcagaagggaaaagatttcaagattcttttgaaattattgctcttcttaaaagatct
tatgactcatacatcaatctcaaagcccagaggatggcttctctttgtgggttccagatg
gctagggaatatttttcagtgggtgacttaaagaatgcaaaatttttttttgatagtgtt
gcagttctatacagacaagaaggatgggtcactttattgtgggaggtcttgggttttttg
cgcgagtgctcaaggaaatgtggaatagtcgaggaatttatagagtattctcttgaaatg
gctgcattgccaatatcatccggtacagggatccagtctttcagatctaaagaatttggt
ccagctggtcctgcaagtcttgagcagaaagagattatacacaaggaggtttttcagctt
gtcaatggagaaacagggttgatgtctgttgatgataacggaattctccatgtgaacaga
gataatccattgcatcttgagattgatcttgtcagcccccttaggatggtacttcttgct
tcagttgcttttcatgaacagataattaaacccggtgtaccgaccttgcttacactgtcg
cttctatcacaattacctgttaccattgatatagatcaagtagaagtgcagtttaatcaa
tcagactgtaactttattatcctaaattctcaaaaacctccatctgctgcaatgtccatt
ggcctacaagggcgacggactgaaactgctccttctctggcgcttgttacaaataagtgg
cttcgtttgacatatgccatcacatctgaacagagtgggaagctggagtgtatatatgtc
gttgcaaaaatggggccccacttcacaatctgctgcagagctgaaaatcctgcttcaatg
gatgatttgcctctttggaagtttgaagaccgtgtggagacttttccaatcaaggatcct
gctctcgccttctccggtcagaaggttgctcaggtcgaagaaccagacccacaagtggat
cttattttaggtgccactggacctgcattggttggagagtgctttgtaattcctgttact
gtggcctccaagggtcattctgtattttctggcgagttaaaaatcaatctggtggatgta
agaggaggtgggttgtttagtccaagggaagcagaaccgttctctatggatagccatcat
gttgagcttcttggtgttagtggaccagaaggagagggtgaatctcaaacaggtcctgac
aaaatcataaaaattcagcagtcctttggtttgatttctgttccatttctccaagatgga
gaatcatggtcctgcaaactagaaataaagtggcatcgacccaaaccgattatgctcttt
gtatcattgggctatttcccagataacaacgaaatgacttcacaaaaagtccatgtccac
aagagcttgcaaattgaaggaaagaatgcacttctaattagccatcaatttatgctgcca
tttcggcaggatccacttttgctttcaaagctcaagccaaaccctaattctgatcagagt
gcatcattgcctctcaatgaaacaagtgtactagttgttagtgccaaaaactgcagtgag
gtgccattacagttacaatccatgtccattgaagtagatgacgatactgaaaggttattt
agcttgcaacacagtggtgaagatcttttaggccctgcgtgccttgtaccaggagaagag
ttcaaaaaggtttttactgtcattcctgaggtggaatcatcaaatgtcaacctagggtca
gtctctctaaaatggaggagagattctcaaaataaagatcagcttcattctgctacagaa
gcttgggtttcgactagacataaacttcctgatgtaaatgtagagttatctccactggtt
ttgattgtggaatgtcctccctatgccattctcggagatccatttacgtactcagttaaa
attcgaaaccagacaccgttgcttcaagagttgaatttctcattggcagatgtgcagagt
tttgtattagccggatctcacagtgacacagtttttgttcttccaaaatcagagcacctc
cttggttacaagattgtaccgcttgcttcaggtttgcaacagttgcctcgagttacagtg
acatccgtgagatattcagctgggtttcaaccatctactgctgcagctactgtttttgtc
tttccttctaaaccctgtgttgatatggccgatatgggagacagagaaatagaatccctt
gtggctgagtag
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