Ricinus communis (castor bean): 8275735
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Entry
8275735 CDS
T01087
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8275735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8275735
03012 Translation factors [BR:
rcu03012
]
8275735
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
8275735
Translation factors [BR:
rcu03012
]
Eukaryotic type
Release factors
8275735
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
8275735
NCBI-ProteinID:
XP_048227872
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Position
3:6538446..6548702
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AA seq
517 aa
AA seq
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MVDIEADIRSLQLDSAEEENNGVVNPEDVKPVEVENVEKMEEDTKDDATLNSKEVQVESK
VKGKEMFPAADVETPDEMEEDNKRRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQK
YEKEAKEKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPN
MISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVS
WSKERYDEIESKMIPFLRSSGYNVKKDVQFLPLSGLVGTNMKTRVDKNTCSWWNGPCLFE
ALDAIEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVTEGDSLLVMPNKTHVKVVAV
YCDENKVRRAGPGENLRVRLSGIDDEDILAGFVLSSVAKPIVAVTEFVAQLQILELLDNA
IFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQANNMIC
IEKFSDFPQLGRFTLRTEGKTVAVGKVTELPTSGSSF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtagatattgaggcggatattcgctctttacagcttgactccgctgaagaagaaaat
aatggggtggttaatccagaagatgtaaagccagtagaagttgagaatgtcgaaaaaatg
gaagaagatacaaaagatgatgctactctgaactccaaggaagtacaggttgaatcaaaa
gtgaaaggtaaagaaatgtttccagcagcagatgttgaaacaccagatgagatggaagaa
gacaacaaaaggcggcatttaaatgtggtgtttattggccatgttgatgctggcaagtct
acaactggtggtcagatacttttcctaagtggtcaggttgatgatcgtacaatccagaaa
tatgagaaagaagctaaggagaaaagtagagagagttggtatatggcatatattatggat
actaatgaagaggagagggttaagggtaaaacggttgaagttggaagagcacatttcgaa
acagagacaactagatttacaattttagatgcaccgggccacaagagttatgttccaaat
atgattagtggagcatctcaagcagatattggtgtactggtgatttctgctcggaaagga
gaatttgaaactgggtacgagagaggtggacagacccgtgagcatgttcagcttgcgaag
actttgggggtgtctaagctgcttgttgttgtaaataaaatggacgatcctactgtgagc
tggtcaaaagaaaggtatgatgaaattgaatcaaagatgataccatttctaaggtcttca
ggttacaatgtgaagaaagatgtccaattcctaccgttatctggtctggttggcacaaac
atgaaaacaagagtggataagaatacatgttcatggtggaatggcccatgtctttttgaa
gctctggatgccattgaagttcctttacgagatccgaaaggtcctttcaggatgcctatt
attgacaaatttaaagatatgggaactgtagtcatgggcaaagtagaatctggtagtgtg
actgagggggactccttgctggtcatgccaaataagactcatgtgaaagttgttgctgta
tactgtgatgagaacaaggttagacgtgcagggcctggtgaaaatctccgtgttagatta
tctggaattgatgatgaggatatattggcaggttttgtcttatcaagtgttgcgaagcca
atagttgcagttacagaatttgttgctcaactacagatccttgaattgctggataatgca
attttcacagctggttacaaggctgttttacacattcattctgtagttgaagaatgtgag
attgttgagctgctacaacagattgatccaaaaacaaagaaacctatgaaaaagaaagtg
ctctttgtgaagaatggtgctgttgttgtgtgccgtgtccaggcaaataatatgatatgc
atcgagaagttttcagatttcccacaacttggaaggttcactcttcgaactgagggcaaa
acagttgcagtgggaaaagttactgaacttcctacttcaggttctagtttttaa
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