Ricinus communis (castor bean): 8275742
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Entry
8275742 CDS
T01087
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8275742
Membrane trafficking [BR:
rcu04131
]
Protein recycling
Others
EARP complex
8275742
Endosome - Golgi transport
Tethering complex
GARP complex
8275742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
Vps54_N
COG4_N
DUF401
LXG
Motif
Other DBs
NCBI-GeneID:
8275742
NCBI-ProteinID:
XP_002532537
UniProt:
B9T2R8
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Position
5:complement(4500616..4516489)
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AA seq
816 aa
AA seq
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MDKSSAFEYINQMFPTEASLSGVEPLMQKIHSEIRRVDAGILAAVRQQSNSRTKAKEDLA
AATHAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQLMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEENNLLQHLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPLSWHVPYRLCIQFCKKTRKQLEGILDNLKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTSSREIGNEIEEIGRDSNSQNVSDIRKKYERKLAAN
QGSGIEEKDGSKDLSVPGAGFNFRGIVSSCFEPHLTIYVELEQKTLMENLDKLVQEETWD
IEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKSHTLLNLFKVFERILKAYVAKLKARLPK
GGLGLVAAATGMDVQIKMSDRDERVICYIVNSAEYCRKTSGELAESVSKIIDPHLAAGVD
MSAVEEEFSGLITEALMTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNSINMILT
SSTPVLGSLLSPVHFQYFLDKLASSLGPRFYTNIFKCKQISETGAQQMLLDTQAVKTILL
EIPSLGRQTSSAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRIL
ELKGLKKADQQSILDDFNKHGPAITQPSIASSVGPTAPAAAITNASLGFIASREDVLTRA
AALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcaagcgcatttgagtacatcaatcagatgttcccaacagaggcatcattg
tctggagttgagccacttatgcaaaaaatacacagtgaaattcgccgtgttgatgctgga
atactagctgctgttcgtcaacagagcaattccagaactaaagccaaggaagatcttgct
gctgctacacatgctgtagaggaactcatgtacaagataagagaaataaaaaccaaagct
gagcagagtgagaccatggttcaggaaatatgccgtgacattaagaagttggactttgca
aagaagcatataacaaccactattactgctcttcaccgtcttaccatgttggtgtctgcc
gttgagcagcttcagttaatggcttctaaacggcaatataaggaggcagctgctcagttg
gaggctgtaaaccaattatgcagccattttgaagcctatagggatataccaaagattaca
gagctcagagagaagttcaaaaatattaaacaaatactcaagtcgcatgtattttctgat
ttctcaagcttaggtactgggaaagagacagaggaaaataatttactgcagcacttatct
gatgcatgtttggtcgttgatgctttggagccatctgtgagagaagagttggtaaataat
ttttgcagtagggagcttacttcatatgaacaaatctttgaaggagctgagctagctaag
ctggataaaacagaacgaagatatgcatggataaagcgtcgaataagaacaaatgaggag
atatggaagatcttccctttgtcttggcatgttccttatcggctttgtatccaattctgt
aagaagacgaggaaacaactggaaggaatacttgacaatctcaaagaaaagccagatgtt
ggaacattgttattggcactacaacgaactttagaatttgaggatgaattggcagaaaaa
tttggaggaggcactagtagtagagagattgggaatgagattgaagaaattggtagggac
agtaatagtcaaaatgtttcagatatacgaaagaagtatgaaagaaaacttgctgctaat
caaggaagtggaattgaagagaaagatggaagtaaagacttatcagtaccaggagctggg
ttcaactttcgtgggattgtttcatcttgctttgagcctcatttgacgatttatgtggaa
ctagaacagaagacgctgatggaaaatctggacaaacttgttcaggaggagacatgggat
atagaggagggcagtcagaataatgttttatccagtagtatgcagctgtttcttataatc
aaaaggagcttaaagcggtgtagtgccctgacaaagagccacacattattgaatttgttt
aaggtatttgaaagaattctcaaagcatatgtggcaaagctcaaggcaagactaccaaag
ggtggcctggggcttgttgcagctgccaccggcatggatgtacaaataaagatgtctgat
agagatgaaagagtaatttgctatatcgtcaattcagctgaatattgccgaaaaacgtca
ggtgaattggctgaaagtgtatccaaaataattgatcctcacttagcagctggagtggat
atgtcagcagttgaggaggaattttcagggcttataacagaagcactaatgaccctagtg
catggcctggaaactaaatttgatgctgaaatggctgcaatgacacgtgttccatggggt
acacttgaaagcgttggtgaccaatcagagtatgtcaatagcataaatatgatccttaca
agtagcactcctgtactcggaagccttctttctcctgttcatttccagtactttttggac
aagctggcatcatcacttggtccacgattttataccaacattttcaaatgcaagcagata
tcagaaactggagcccaacaaatgcttttagatactcaggctgtaaagacaattcttcta
gagattccttcacttggtcgacagacatcaagtgctgctagctattcaaagtttgtgagc
cgtgaaatgagtaaagctgaagcgcttttgaaggttatactctccccagttgattctgtg
gcagatacatatagggcattgctaccagagggaacaccaatggagtttcaacgtattctg
gagcttaaggggcttaaaaaagcggatcagcagagcatactggacgacttcaacaaacat
ggaccagcaattacacaaccttcaattgcatcatcagttggacctactgctccagctgct
gcaataacaaatgcatcacttggatttattgcttcccgagaagacgttcttaccagagca
gctgcgcttggaagaggtgctgctacaacaggtttcaagaggttccttgctctaacagaa
gctgcaaaggatcggaaggatggaccatttagaaaactcttcaatgcctaa
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