Ricinus communis (castor bean): 8275754
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Entry
8275754 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8275754
KO
K14827
pre-rRNA-processing protein IPI1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
8275754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8275754
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
8275754
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
CEP104-like_TOG
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
8275754
NCBI-ProteinID:
XP_015582954
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Position
10:17115949..17124523
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AA seq
866 aa
AA seq
DB search
MAKTKASSKKQQKRGVDFKKIKRKLGRKLPPPKNATNTEIKSKAIVLPEQSVASDKAGLA
VSKKGLTLKELLQQTSHHNAKVRKDALNGMRDLFLKYPEELTMHRYAVMEKLRERISDDD
KMVRETLYQLLKSVVLPGCKEDNQVPFISLMMAYIFNAMTHLAVEVRLAAFKFFDLVLQH
HPLAFSLYAEKVLQNYGDILRKNPFYLEDKGKLKNVLAGLQRCLSLLPSNKTGSDSSEKK
VIGQDLLYAFEPDTPTESAELSVIFNKLKDLLPILVNCFQDFIPLFHSMPVLDAQSFDCM
RSILQSIDLVIRLFVYETVRSNTESHASLWDENILFLTLKKILAVFPLYPMHHLSEKDDE
RYFTLNIMITETFLHLSECICPPADLLEKFLAFIECALLGKICSDTRSGRIVREKQILTL
IPFIPKLVAPVTRNWKSHLLQAFTKTFLECNPESPVKMACLTAIEEMLFSGEGVLYPDVS
DSEILDHQVTWIRELPLLLILLGNKHASSSQIVLHLLLRLGQCSILNSFLALEYDNIQYS
LQEFYSTCAEGDLCYGPFIKLPRESQELSICCLYYFSHLDSFLLKAIASCCFCPELDTSV
LFQMIEVLHSAYKAGHIQITDHISFFITLVSCFKAMPENLSPSVEEGVKTSSCRTFKTLG
RVLCSCLSEMGDNSLVFLILERIIIEQILLTPPVVNACAMLRMLVVLDSKPTRLSEESIT
ALSNFLPKYLIDVVHYPLGEADESRQRYYILPCFFLFDRSHKLLRLVLNAMSSLITDSTP
LSSGDHGHSSRITAVVSVLLLMHKDSKIEQLLSLLRAEVDLISQNICSVQSSAGSSLSVG
ERHKIQCALDQLKTITSSLPQEMKNA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagactaaagcttcctcaaagaagcagcaaaagcgtggtgttgatttcaagaaa
attaagcgaaagctcggaagaaaattgccacctcctaagaatgctacaaacactgaaatt
aaatccaaagcaattgttcttcctgagcagagtgtggcctctgataaagctggtttagct
gttagcaaaaaaggcttgactttgaaagagcttcttcaacaaacttcccatcacaatgca
aaagtccgcaaagatgcattgaatggtatgagagatttatttctgaagtatccagaagaa
ttgacaatgcacagatatgcagttatggaaaaactacgagagcgcatcagtgatgatgat
aaaatggttcgggaaaccctttatcaacttcttaagtcagtggttttacctggctgtaaa
gaggataatcaagtgcctttcatttctttaatgatggcgtacatttttaatgcaatgaca
catttagcagttgaagttcggcttgcagcttttaagtttttcgatcttgttctgcagcat
catccacttgcattttccctatatgctgaaaaggttcttcaaaattatggggatattctg
cggaagaacccattttatttggaagacaagggcaagctgaagaacgtgcttgctggtttg
cagcgatgcttgtctttgttgccatcaaataaaacaggatctgattcatctgagaagaaa
gttattggccaagatttgttgtatgcttttgagcctgacacgcctacagaatctgctgag
ttatctgtcatcttcaataaactaaaggacttgcttccaattttagtcaattgcttccaa
gatttcattccattatttcatagcatgccggtgttggatgcacaatcatttgattgcatg
cggagcatacttcaaagcattgaccttgtaatcaggctttttgtttatgagactgtaagg
agtaatacagaatcacatgcttctttatgggatgaaaatatcttgtttcttacactgaag
aaaatattagccgtattcccgctctacccaatgcatcacctttcagagaaggatgatgag
agatattttaccttgaacattatgatcactgaaacatttttgcacttgagcgagtgcatc
tgccctcccgctgacttgctagagaaatttcttgcgtttatagagtgtgcgctgcttgga
aagatctgcagtgacacaaggtctggcagaatagtgagagaaaagcagatacttacactg
attccttttatcccgaaacttgtagcacctgttacaaggaattggaaatctcaccttcta
caggcatttacaaagacattcctcgagtgcaatccagagtccccagtaaagatggcttgc
cttactgcaatagaagaaatgctcttctctggagaaggtgtgctttaccctgatgtaagt
gattcagaaattttggaccatcaagtcacgtggatcagagagctgcctctattattaatc
ctcttgggcaataaacatgcttcctcttctcagattgtgctgcatcttctgcttcggctg
ggtcaatgttctatcttgaactccttcctcgcattggaatatgacaacatccaatactca
ctgcaagaattttacagcacatgtgcggaaggggatttgtgctatggtcctttcataaag
cttcctagggaatctcaagaactctctatctgctgtctttattatttctctcacttggat
tcatttttgctgaaggcaatagcttcttgttgcttttgtcctgagttggatacatcagta
ttgtttcagatgatagaggttttgcattcagcttataaagctggtcatattcagataact
gatcacattagcttcttcattactttggtctcctgtttcaaagctatgccagaaaatttg
tctccttcagtggaggaaggcgtgaagacctcaagctgtagaacttttaagacattgggc
agggttctttgctcatgtttgtcagagatgggtgataattctctagtttttctgatactg
gagagaataataattgagcagatcttattaacgccacctgtagtcaatgcctgtgctatg
ctgagaatgcttgttgtgctagactccaaacccacaagactttctgaagaaagcatcact
gctttaagcaatttccttccgaagtatctgattgatgtggtccattatcctctgggagaa
gctgacgagtccagacaacgttattatattcttccttgctttttcttgtttgatagaagc
cataaacttctacgtcttgtgttgaacgcgatgagttcactgataaccgacagtactcca
ctttcatctggtgatcatggccactcgagcaggataacggctgttgtttctgtcctactt
ctgatgcataaagattcaaagattgagcaactcctttctttattgagggctgaggtcgac
ctcatctcgcaaaacatctgctctgtgcagtcatcagcgggaagcagtctgagtgttggg
gaaaggcataaaatacaatgcgcattagatcaactaaagactataacaagttcgttgcct
caggagatgaaaaatgcctag
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