Ricinus communis (castor bean): 8275922
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Entry
8275922 CDS
T01087
Name
(RefSeq) ABC transporter B family member 6 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8275922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8275922
04147 Exosome [BR:
rcu04147
]
8275922
04090 CD molecules [BR:
rcu04090
]
8275922
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8275922
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8275922
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8275922
CD molecules [BR:
rcu04090
]
Proteins
8275922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
AAA_21
AAA_15
SMC_N
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-GeneID:
8275922
NCBI-ProteinID:
XP_015582580
LinkDB
All DBs
Position
6:23956671..23969977
Genome browser
AA seq
1401 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTSAEAAAAAAAAAQAEAEEEMEEA
EEMEAPPAAVPFTGLFACADGVDLGLMVIGSIAAAAHGTALVVYLHYFAKIVEVLKIAPD
ERFDRFKDLALTIVYIAVGVFAAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDT
YGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFVSGLVIGFVNCWQIALITLATGPF
IVAAGGISNIFLHRLAESIQDAYAEAASVAEQAVSYIRTLYAFTNETLAKYSYATSLQAT
LRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHHKAHGGEIITALFAVILSGLG
LNQAATNFYSFDQGRIAAYRLYEMISRSSSTVNQEGNTLVSVQGNIEFRNVYFSYLSRPE
IPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWL
RSLIGLVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKIAHAHTFISSLERGYEMQVGRA
GLSLTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIAR
RLSLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLKCEEAAKLPRRMPARNYMETA
AFQVEKDSSAGYSFQEPSSPKMMKSPSLQRVPGISRLPDGTFNSQESPKVRSPPPEKMME
NGVPLDGADKEPAIRRQDSFEMRLPELPKIDVHSAQRQTSNGSDPESPVSPLLTSDPKNE
RSHSQTFSRPHSHSDDVPTKFKDAKDTKHRETPSFWRLAELSLAEWLYAVLGSIGAGIFG
SFNPLLAYVIALIVTAYYRPDRHHLQEDVDKWCLIIACMGIVTVVANFLQHFYFGIMGEK
MTERVRRMMFSAMLRNEVGWFDEEDNSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAV
VVAVIIGMLLQWRLALVALATLPILMVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRN
IYTVVAFCAGNKVMELYRLQLKKIFKQSFFHGMAIGFAFGFSQFLLFACNALLLWYTAYS
VKENYTDLPTAIKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDEN
SALKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLM
ERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEM
KEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSS
IESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGAHDTLMAKN
GLYVRLMQPHFGKGLRQHRLI
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttctaggggactatttgggtggtccccaccgcatatacaaccgttaacaccg
gtatcggaggtatccgagccaccggagtcgccgtctccttacttagatacaagtgcagaa
gcagctgcggcagctgcagcggcggcgcaagcggaggcggaggaagagatggaggaggca
gaagagatggaagcgccgcctgcagcggttccgtttacgggattgtttgcgtgtgcagat
ggagtggatttgggacttatggtaattggttcaattgctgctgctgctcatggaactgct
cttgttgtttacttgcattattttgctaagattgttgaggttttgaagattgctcctgat
gaaagatttgacaggtttaaagatcttgctttaaccattgtttatatagctgtgggtgtt
ttcgcagctggttggattgaggtttcgtgctggattttaactggagagcgtcagaccgct
gtcatcaggtctaactacgttcaagtgttacttaatcaggatatgagtttttttgatacc
tatgggaacaatggagacattgtgagccaagtactgagtgatgtgctgctcattcagtct
gcacttagtgaaaaggttggaaactatattcataacatggcaacatttgttagtggtctt
gttattggatttgtcaactgctggcagattgcccttataacattagccactggtcctttc
attgttgctgctggtggtatatcaaacatttttcttcacaggctggctgagagcattcaa
gatgcatatgcagaagctgctagtgttgctgaacaggcagtttcatatattaggacctta
tatgcgttcacaaatgaaactttggcgaaatattcttatgcaacttcactacaagcaact
ctgagatatggtattttgattagtcttgtgcaaggacttggtcttggttttacatatggg
cttgcgatatgttcttgtgccttgcagctatgggttggaaggttcctggttactcaccac
aaagctcatggtggtgaaataataacagccctttttgctgtgattttgagtggccttggg
ctgaatcaagcagcaacaaacttctattcgtttgaccaaggacgaattgctgcttacaga
ctttatgagatgataagccgatcatcctcaacagttaatcaagaaggaaacactctagtg
tcagtgcaaggaaatattgagtttcggaatgtttattttagctatctgtctcgtccggag
atccctatcttgagtgggttttacctcactgtacctgctaaaaaagctgtcgcacttgtt
ggcagaaatggctctggaaaaagcagcattatccccctcatggagcggttttatgatccc
accttaggggaagttcttttagatggagagaatattaaaaacttgaaactggagtggctt
agaagccttataggattagtcacccaggaacctgccttgctaagtttgagtataagggat
aatattgcttatggacgagatgctactttggatcagattgaagaagctgccaaaatagca
catgcacatacattcataagctcacttgagagaggctatgagatgcaggtgggtagagct
ggtttatcgttgacagaggaacagaaaattaaactttcgattgctagagctgtgcttttg
aatccaacaattcttctgcttgatgaggttactggtggacttgattttgaagctgaaaga
gcagttcaggaggcgttagatctcctcatgttgggacgatccactataattatagctcga
cgtcttagtcttattaggaatgctgattacatagctgtaatggaggagggtcagcttgtt
gaaatgggaacacatgatgaattgttaaacttagatggcctatatgcagaacttctcaaa
tgtgaagaagcagcaaaacttccgagaaggatgccagctagaaactacatggagactgct
gctttccaagttgaaaaggactcttctgctggttacagcttccaagaaccatcctcccct
aaaatgatgaaatcaccatctcttcagagagttcctggtatatcacggcttccagatggc
accttcaactctcaggaatcacccaaggttcgtagtccgccacctgagaaaatgatggaa
aatggtgttcccttagatggagctgataaggaaccagcaataagaaggcaggatagtttt
gaaatgcgacttccagagttacccaagattgatgtgcattctgcacaacgacagacatca
aatgggtcagatcccgaatcaccagtatcacctcttttgacatctgatccgaaaaatgag
cgctcccactcgcagacttttagtcgaccccatagtcactctgatgatgttccaactaaa
ttcaaggatgcaaaggacacgaagcatcgtgaaacaccatcattttggaggctggcagaa
cttagtttagctgagtggctttatgctgtgctaggaagcattggtgctgggatttttggc
tcttttaatccacttcttgcttatgttattgcactgatagtgactgcctattataggcct
gatcgccatcacttgcaggaggatgtagacaaatggtgcttgataattgcctgcatgggt
atagtaacagtggttgcaaactttctgcaacatttctattttggtattatgggtgaaaaa
atgactgagcgagttcggagaatgatgttctcagctatgctgcgcaatgaagttggatgg
tttgatgaagaggataatagtgctgatacattatccatgcggttggcaaatgatgctaca
tttgtgcgagcagcatttagcaaccgtctttctatatttatacaggatagcgctgctgtt
gttgtggctgttatcattggcatgttgcttcaatggcgactggctcttgtggcgttggca
accctgccaattctcatggtttctgcaattgcacagaagttgtggcttgctggcttttca
aggggcattcaggagatgcacaggaaggcatcattggttcttgaggatgctgttagaaac
atttacactgttgtagcattctgtgctggtaacaaagtaatggagctctacagattacaa
ctgaaaaaaatttttaagcagagctttttccatggaatggccattggttttgcatttggc
ttttcacagtttcttctatttgcctgtaatgcccttcttctctggtacactgcatactct
gtaaaggaaaactatacggatctgcctacagctatcaaggagtatatggttttctcattt
gcgacatttgcactagtagagccttttggattggctccatatattcttaaacggcggaaa
tctcttatttcagtttttgaaattatagatagagtacccaagattgacccagatgagaac
tcagcactgaagccacctaatgtgtatgggagcattgagttaaagaatgttgatttctgt
tatcctactcgcccggaagtcttggtattgagcaatttcagtctcaaagtcaatggtgga
caaactgtagctgtggtaggagtttcagggtctggtaagagcactataatctctttaatg
gagagattttatgatccagttgctggtcaggttctacttgatgggcgagatctaaaactc
tacaatttgagatggttaaggagccacttaggccttgttcagcaggaaccaattatcttc
tcaacgacaattagagaaaatatcatatatgctaggcacaatgctagtgaagctgagatg
aaagaggctgcaagaatagcgaatgctcaccacttcattagcagtctgcctcatgggtat
gacacacatgtggggatgaggggtgttgacctgacaccgggacagaaacagagaattgca
attgcacgggtggtactgaagaatgcgcccatcttgttattggatgaagctagttcatcc
attgaatctgaatctagtagagtggtacaagaggcacttgatacactgattatgggaaac
aaaacaactattctgatagctcatagagctgcaatgatgaggcatgttgacaatatcgtg
gttctaaatggagggcgaatcgtagaggaaggggctcatgatactttgatggccaagaat
ggtttgtacgtcaggttgatgcaaccccactttggaaagggtttgagacagcatcgactt
atttag
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