Ricinus communis (castor bean): 8275957
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Entry
8275957 CDS
T01087
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8275957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8275957
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
8275957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
8275957
NCBI-ProteinID:
XP_002532010
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Position
7:complement(22695287..22701128)
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AA seq
478 aa
AA seq
DB search
MQSDNGKLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVA
ERVIMEKHNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTE
TDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVK
RAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYTPSAVGGYGLRMDGRFSPVAGGR
SGFPPFGSGYGMGMNFEPAFSPSYGGNANFSSNLSYGRGMSPYYIGNTNRFANPTGYDGG
NGGNSSFFSSVTRNLWGNGGLNYNSSSASSNTYMGSGSGSIGGNNFGNSAVNWGSSTLAA
HGGGSNASNNNLNFGYGGGENSFSLGTGGYGRNSVNNLATTSSYAASNGSFDGTFGDLYG
GGSDYGDPTWRSSNSERDGSGSFGYGLGNATSDASVKNSPGYVGYSVNKRQTNRGIAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgataatggtaaattatttatcggtggaatttcatgggacaccaatgaagag
cgactcaaggagtattttgggtcatttggggaggtggtggaggctgtaataatgaaggat
cgaaccacagggcgagcccgcggttttggttttgttgtttttgctgatgcagctgttgca
gagagagtcattatggaaaaacacaatattgatggcaggatggttgaggcaaaaaaggct
gttcccagggatgaccagaatattctgaatagaagcactggtagtagcattcatggttct
cctggcccaggccgcacaaggaagatttttgttggaggtttagcatccacagttaccgag
actgattttaggaagtattttgagcagtatggaacaattacagatgtggtcgtgatgtat
gatcacaacacccagaggccaagggggtttgggttcattacatatgattcagaagaggca
gtggacaaagttttgatgaagacttttcatgaattgaatggaaaaatggttgaagttaag
cgtgcagttcccaaagagttatctcctggtcccagtcgcagcccacttggtggatataac
tatggtttaagtagagttaatagtttccttaatggctacactcaggggtatactccaagt
gcagttggagggtatggacttaggatggatggtaggttcagtccagttgctggaggccga
agtgggtttcctccatttggttctggttatggaatgggtatgaattttgagccagctttc
agccctagttatggagggaatgctaattttagtagcaatctcagttatggacggggaatg
agcccttactatattggtaatacaaatagatttgctaatcctacaggatatgatggaggt
aatggaggaaatagttcttttttcagttcagtaactaggaacttgtggggaaatgggggc
cttaattataatagtagctctgcaagctccaatacatacatgggttctggaagtggaagc
ataggcgggaataactttggcaacagtgcggttaattggggttcttcgacacttgcagca
catggaggaggaagtaatgcttccaacaacaacctgaattttgggtatggaggtggtgaa
aacagttttagtctgggcacagggggatatggaagaaacagtgtcaacaatttggccaca
acttcatcatatgctgcatcaaatggtagttttgatggaacctttggcgacctttatggt
ggaggttctgattatggggatcccacctggcgatcgtcgaactctgagcgagatggatct
ggctcctttggttacggccttggcaatgccacttccgacgcttcagtaaaaaattctcct
ggttatgttggttatagtgttaataagagacagacaaatagaggaattgctgcttag
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