Ricinus communis (castor bean): 8275976
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Entry
8275976 CDS
T01087
Name
(RefSeq) structural maintenance of chromosomes protein 1 isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8275976
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
8275976
Meiosis-specific proteins
Cohesin complex and associated proteins
8275976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
ABC_tran
DUF1664
DevR
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
8275976
NCBI-ProteinID:
XP_015582611
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All DBs
Position
7:complement(23427763..23439564)
Genome browser
AA seq
1222 aa
AA seq
DB search
MPSMISTGKILKLEIENFKSYKGQQTIGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAYDDREKEQKGRRAYVRLVYLLASGSELHFTRTITSSGSSEYRIDGKV
VNWDEYNGRLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSEDLKREYEDL
EERKARAEENSALVYQKKRTVVMERKQKKEQKEEAEKHLRLQDQLKALKKEHFLWQLFII
DKDINKINDDLETEKRNREGVMQELEKFNIEENKKKKELAKYLKEIAQCERKIAERSSKL
DKNQPELLKLNEAMTRINSKIKSSRKELDKKREERRKHADEIDELQKGILDLTAKLEDLH
EKSRDTSDKLPLADGQLTEYFRIKEDAGMKTIKLREEKEVLDRQQHADMEAQKNLEENLQ
QLKNRESELNAQEAQMRARQEKIQETSTKNKKELADLKKESREMHDKHRDSRIKCENLKS
RIGEVEIQLREVKADKYENERDARLSQAVEDLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGRFMDAVVVEDEYTGKECIKYLKEKRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLVF
DVIQFDPVLEKAILFAVGNTLVCDDLDEAKVLSWSGERFKVVTVDGILLTKSGTMTGGTS
GGMEARSKQWDNDKIKESIAKLKKKKEQLEKELEELGSDREMKLKESEASGKISGLEKKI
QYAEIEKRSIKDKLETLKREKQIIKEETDRIKPELLKLKDGIDKRATEIRKLEKRINEII
DRIYKDFGKVVGVTNIREYEENHLKAAQHVAEERLNISNQLAKLKYQLEYEQKRDMESRI
KKLETSISSLENELKQIQKKEAEVKLATEKATGDMDKWKEEVRDWKSKAEECEKEMLEWR
KQGSAATTSISKLNRQINSKEGQIEQLLSRKQDIVEKCELEHINLPTISDPMEVDSMIPG
PFFDFSELNRSLLQDRRPSDREKLEVDFKQKMDAIMSEIEKTAPNLKALDQYEALQEKER
VVTEEFEAARKEEKRVADAYNSVKQRRYELFMEAFNHISNNIDKIYKQLTKSNTHPLGGT
AYLNLDNEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFIL
DEVDAALDNLNVAKVAGFIRSKSCEGVRSNQNADGGSGFQSIVISLKDSFYDKAEALVGV
YRDSERSCSRTLTFDLTGYRQS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaatgatatcaacaggtaaaattctcaaattagaaatagagaacttcaaatcg
tataaaggacaacaaacaatcggcccgtttaaagacttcacggcaataattggaccaaat
ggagctgggaaatcaaacttaatggacgcaattagcttcgtacttggtgtccgtacaggt
caattgcgtggggcccagcttaaggatctaatttacgcatatgatgatcgtgaaaaggag
cagaaaggtcgtagagcttatgtacggttggtttatttgctagcaagcgggtcggagctt
cattttacccggactattacgagttcaggaagcagtgagtatcggattgatggcaaggtt
gttaattgggatgagtataatggaagactaaggtctttgggtattcttgttaaggctagg
aattttttggtctttcagggtgatgtggaatctattgcctctaaaaacccaaaagaattg
actgcattgcttgagcagatttctgggtctgaggatctcaagagagaatacgaggatctg
gaagaaaggaaggcccgtgctgaagaaaactctgctcttgtttatcagaaaaaaagaaca
gtagttatggagaggaaacaaaagaaagagcaaaaggaagaagcagaaaaacatcttcgc
ttgcaagatcaactgaaagctctgaaaaaagaacacttcttatggcaattgtttatcata
gacaaagacataaacaagatcaatgatgaccttgaaactgaaaagagaaatcgtgaaggt
gtcatgcaagaattagagaagtttaacatagaagaaaataagaagaaaaaagaactagcc
aagtacctgaaagagattgctcaatgtgaaaggaagattgcagagagaagttcaaaactt
gacaagaatcaaccagagcttctgaaattaaatgaggcaatgactcgtataaattcaaaa
atcaagagtagccgtaaggagcttgataaaaaaagagaagaacggaggaaacatgctgat
gagatagatgagctgcagaaggggatactagatctgactgcaaagctagaagatctgcat
gaaaaaagtcgagatactagtgacaaactccccttggctgatggtcaattaactgaatat
tttcgaattaaggaggatgctgggatgaaaactatcaagctaagggaagaaaaggaggtt
ctggacaggcaacaacatgctgatatggaagctcaaaagaatttagaagaaaaccttcaa
cagttgaaaaatagggagtctgaactaaacgcacaggaggcacaaatgcgagcaagacaa
gaaaagattcaggaaacttccacaaagaataagaaggaattggctgatttgaaaaaggaa
tcaagagagatgcatgataaacaccgtgattccaggattaaatgtgaaaatttgaagtct
agaattggtgaagtggaaatccagttgcgagaagtgaaagctgataaatatgagaatgag
agggatgctaggttgtctcaagctgttgaggatctcaagcgcctattccaaggagttcat
ggacgaatgactgatctttgtaggccaactcagaagaagtacaatcttgctgttactgta
gctatgggtagatttatggatgcagtagtggttgaagatgaatatacaggaaaagagtgc
attaagtatctgaaagagaaaaggcttcctcctcaaactttcatacctcttcaatcagtt
cgtgtaaagccaatcattgaaaggttgcgtaccttaggtggtactgctaagttggtcttt
gatgtcatccaatttgatcctgttcttgagaaggcaattctctttgctgttggaaatact
ttagtatgtgatgacctagatgaagccaaggttcttagctggagtggagaaaggtttaaa
gttgtaactgttgatgggatcctactcacaaagtccggaacaatgactggtggtaccagt
ggtggaatggaagcaaggtcaaaacagtgggataatgataaaattaaagaatctattgca
aagctaaagaagaagaaagagcagctcgagaaagagttggaagagcttggatcagataga
gagatgaagttaaaagaatctgaagcatctgggaaaattagtggacttgaaaagaagatt
cagtatgcagagattgaaaagagaagtatcaaggacaaacttgaaaccttgaaaagggaa
aagcagattattaaagaggaaactgatcgtataaaacctgaactgcttaagctaaaggat
ggtattgataaaagggccactgaaatcagaaagttggagaagagaatcaatgagattatt
gatcgaatttacaaagattttggtaaggttgttggggtaacaaatatccgtgagtatgaa
gaaaaccatcttaaggctgcccaacatgttgcggaagaaagacttaacataagtaatcag
ctggcaaagttgaagtaccagttggagtatgagcaaaagcgagacatggaatcaagaatt
aagaaattggaaacgtctatcagttctttagaaaacgaactaaaacaaattcagaaaaaa
gaagctgaagtcaagttagcaacagagaaagctactggtgatatggataagtggaaggaa
gaagtgagagattggaaatccaaggcagaagagtgtgagaaagagatgcttgaatggagg
aagcagggttctgcagctacaacaagcatatccaagctcaaccgtcagataaactctaag
gagggacagattgagcagctattgtctcggaagcaggatatagtagagaagtgtgaatta
gagcatattaaccttcccactatttcagatcctatggaagttgactccatgatcccaggc
ccattttttgattttagcgagctgaatagatcccttcttcaggataggagaccttctgat
agggaaaaacttgaggtggattttaagcaaaaaatggatgccattatgtcagaaattgaa
aaaactgctccaaacttgaaggctctggaccagtatgaagctttgcaagagaaggaaaga
gtagtaactgaagagtttgaagcagccagaaaagaggagaagcgagtagctgatgcttac
aattcagttaaacagagaagatacgagttgtttatggaagcttttaaccacatatcaaac
aatattgacaaaatttataaacaactaacaaagagtaacacacacccacttggtgggacg
gcatatctgaatctagataacgaggatgaccctttcttacatggcatcaaatacactgct
atgccaccaactaagcgtttccgtgatatggaacagctgtctggcggggagaagactgtt
gcagcactggctttgctcttttctattcacagctataggccgtcgccatttttcatattg
gatgaagtcgatgctgcattagataatctaaatgttgcaaaggttgccggattcattcgc
tcaaaatcatgtgaaggagtccggagtaatcagaatgctgatggtggcagtggttttcag
agtattgttatatccttgaaggatagcttctatgacaaggctgaagctttggttggggtt
tacagggattcggagagaagctgttcaagaactctgacttttgacttgactggatatcga
cagtcttga
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