Ricinus communis (castor bean): 8276028
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Entry
8276028 CDS
T01087
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8276028
03036 Chromosome and associated proteins [BR:
rcu03036
]
8276028
Transcription factors [BR:
rcu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
8276028
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
8276028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
CHDNT
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
8276028
NCBI-ProteinID:
XP_002517473
UniProt:
B9RUM8
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All DBs
Position
5:29471939..29477667
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AA seq
640 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGLTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDHANLTSFFQSNCGITLEEKQLSVSGRNWGEVDLNGNMLT
FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNTQFV
GDENHPPAQVFRDKIMSMADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFDTDFVVQSTLTMN
EDLLSTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHATGSSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDMKTTNGVAAVLQNDDDDAVDPHLERIKNEAGDESDEE
DSDFVADKDDGGSPTDDSGEEDSDGSLSGDGTEKHVRKESTKEPSSSKAAPKKRSKDGND
DGKKKKQKKKKDPNAPKKAMSGFMFFSQMERENVKKSNPGIAFGDVGKILGDKWKKLSAE
EKEPYEAKARADKKRYKEEVSGYKNPQPMDIDSGNESDSE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggtcacctcttcaacaatatctctctcggaggccgtggcggcactaatccc
gggcaacttaaattacattctggggggatcctatggaagaagcagggcggtggtaaagca
gtggaagtcgataaagctgatattgcaggactgacatggatgaaggttccgaggacaaac
caacttggtgttcgaatcaaagatggattattctacaaattcactggattccgagaccag
gaccatgcaaacttgactagctttttccaaagcaattgtggaataacactagaagagaaa
cagctttcagtcagtggccgtaactggggagaggttgatttaaatggaaatatgcttacc
tttttggttggttcaaagcaagcatttgaggtatctttagcagatgtctcacaaacacaa
atgcaaggaaaaaatgacgtcattttggagtttcatgtggatgatacaactggagctaat
gagaaggattcattgatggagataagttttcatatacctagtaacaatacccaatttgtt
ggtgatgaaaatcaccctcctgcccaggttttccgagacaaaataatgtcaatggcagat
gttaatcctggaggtgaagaagctgtcgttacatttgatggtgttgcaattctcacaccc
aggggtcgttacagtgtcgaacttcatctgtcattcttgcggctccaaggacaggccaat
gatttcaaaattcagtacagcagtgttgttcggctttttttgctaccaaagtctaaccag
ccgcatacctttgttattgtaactcttgatccacccattcgtaaggggcaaactttgtat
ccacacattgtcttacagtttgataccgactttgtggtccagagcactttgacaatgaat
gaagaccttttgagcacaaagtacaaggacaagttagaaccatcatataaaggactcatc
catgaagtgttcacaacaatattgcgtggcttgtctggtgctaaagtaactaagccagga
aaattccgtagctgtcaagatggttatgctgtgaagtcatcgttgaaagctgaagacggc
ctcttatatccacttgagaaaagtttcttcttcttacccaaacctccaaccctcattctg
catgaggagattgactatgttgaattcgagaggcatgcaacaggtagctcgaatatgcat
tactttgatcttcttataagactcaaaacggagcaagagcatctattccgcaatatccag
agaaatgaataccacaatctttttgacttcatcagtgggaagggcttgaaaattatgaac
ctgggtgatatgaaaaccacaaatggagtggctgctgttctccagaatgatgatgatgat
gcagttgacccacatctcgagcgcattaagaatgaagctggagatgagagtgatgaagag
gattcagattttgttgctgacaaagatgatggaggttctcctaccgacgattctggggag
gaagattctgatggtagtttaagtggagatggaacagagaagcatgtgaggaaggaatct
acaaaggagccatcatcctctaaggcagctcctaagaagagatccaaagatggaaatgat
gatggtaagaagaaaaaacagaagaagaagaaggatccaaatgcaccaaagaaggcgatg
tctggtttcatgttcttttcgcagatggagagggagaatgttaagaaaagtaatcctggc
attgcttttggggatgttggaaaaatactcggggacaagtggaaaaagctgtcagcggag
gagaaagaaccgtatgaagcaaaggcgcgagcagataaaaaacgctataaagaggaagtt
agtggctacaagaacccgcaaccaatggatatagactcaggaaatgagtctgatagtgaa
tag
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