Ricinus communis (castor bean): 8276048
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Entry
8276048 CDS
T01087
Name
(RefSeq) ABC transporter B family member 19 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8276048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8276048
04147 Exosome [BR:
rcu04147
]
8276048
04090 CD molecules [BR:
rcu04090
]
8276048
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8276048
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8276048
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8276048
CD molecules [BR:
rcu04090
]
Proteins
8276048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_29
AAA_22
nSTAND1
AAA_15
RsgA_GTPase
DUF87
Glyco_transf_22
DUF4044
Motif
Other DBs
NCBI-GeneID:
8276048
NCBI-ProteinID:
XP_002517493
UniProt:
B9RUP8
LinkDB
All DBs
Position
5:complement(29358817..29366784)
Genome browser
AA seq
1259 aa
AA seq
DB search
MAAETAVESNTTSTTKAPLPPEAEKKKEQSLPFYQLFSFADNYDWLLMISGSTGAIIHGS
SMPVFFLLFGEMVNGFGKNQSDLTKMTHEVSKYALYFVYLGLVVCLSSYAEIACWMYTGE
RQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTF
LAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYAQAGIIAEQAIAQ
VRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVF
IRNEQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIIQDPS
DGKCLPEINGNIEFKDVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLI
ERFYDPNQGQVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMDEV
EAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSA
LDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELISKGA
AYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGR
IEMISNAETERKNPAPDGYFCRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMSNMIE
VFYYRNPASMERKTKEYVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILR
NEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVS
LLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKILS
LFCHELSVPQLRSLRRSQTSGLLFGLSQLALYASEALILWYGAHLVSKGVSTFSKVIKVF
VVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRSTRIDPDDPEAEPVESIRGEIELR
HVDFSYPSRPDVPVFKDLNLRIRAGQSQALVGASGCGKSSVIALIERFYDPTAGKVMIDG
KDIRRLNLKSLRLKVGLVQQEPALFAASIFDNIAYGKEGATEAEVIEAARAANVHGFVSA
LPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALER
LMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHAELVSRGDGAYSRLLQLQHHHI
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaacagcagttgaatctaatactactagtactactaaagcaccattgcca
ccagaggcagagaaaaagaaagaacaaagcttgccgttttatcagctattctcatttgct
gataactatgattggttacttatgatctctggtagtacaggagctattattcatggctct
tcaatgcctgttttcttcttgttatttggcgaaatggttaatgggtttggtaaaaaccaa
tctgatttgacaaaaatgactcacgaagtctctaagtatgctttatattttgtgtatctt
ggccttgttgtatgcctatcgtcctatgcagagattgcgtgctggatgtatactggagaa
aggcaagtaagcacactgaggaagaagtatttagaggcagtgttgaaacaagatgttggg
ttctttgatacagatgcaagaactggtgatattgtctttagtgtctcaacagacaccctt
ctcgttcaagatgccattagtgagaaggttggtaactttatacattatctgtcaacattt
ctagctgggctagtggttggttttgtatcagcatggaggctagcgttgctaagtgtggca
gtcataccaggaatagcatttgccggtggcttatatgcatacactctaaccggcctgaca
tccaaaagccgtgaatcctatgcacaagccggcataattgctgaacaggctattgcgcaa
gttcgaaccgtctactcatatgttggagagagcaaagccctaaattcatactctgatgca
atacagaacactttaaagcttggatacaaggctggtatggccaaaggtttgggactggga
tgtacctatggaattgcatgcatgtcatgggcccttgtattttggtatgctggagttttt
atcaggaatgaacaaaccgatggagggaaggcattcaccgcgattttctctgccattgtt
ggtggaatgagtttgggccagtcattttcaaatcttggtgcttttagcaaaggcaaagca
gctggatacaagttgatggaaattataaagcaaaagcctactataattcaagacccctca
gatggcaagtgcttgcctgaaattaatggaaacatagaattcaaggatgtgactttcagc
tacccatcaaggccagatgttatcatattccgtgatttctcaatcttctttcctgctgga
aagactgttgctgttgttgggggtagcgggtcagggaaaagtactgttgtctctcttatt
gagaggttttatgatcctaatcagggccaagttttgctggataatgtggacataaagacc
ctgcaactgaggtggttacgcgatcaaattggattggtgaatcaagagcctgctctcttt
gcaaccaccatactcgagaacatactctatggaaagcctgatgcaacaatggatgaagtg
gaagctgctgcttctgctgcaaatgctcacagtttcatcaccttgcttcccaatgggtat
aacactcaggtgggagaaagaggagtgcaactctcaggtggtcaaaaacagagaatagca
attgctagagctatgttaaagaacccaaagatcctccttcttgatgaagcaaccagtgcc
cttgatgcaggttctgaaagcattgttcaagaagcattagaccgtctcatggttggaaga
acaactgtagttgttgcacatcgactctccacaattagaaatgtcgatacaattgcagtt
attcaacaagggcaagttgttgagacagggacccatgaggaactgatttcaaaaggagca
gcatatgcttcattaattagattccaagaaatggtgagaaatagagacttcgctaaccca
tcaactcgacgatcacgctcaacacgtttaagtcattcactttcaacaaagtctctaagc
ctccgctctggcagtttacggaacctaagctattcatacagtacaggggctgatggccgc
attgaaatgatatcaaatgctgaaactgaacgtaagaatccagcacctgatggctacttc
tgcagactgcttaagctaaatgctcctgaatggccatattctataatgggtgctatagga
tctgtactttctggttttattggtccaacctttgccatagtgatgagcaacatgattgag
gttttctattatagaaatcctgcttccatggaaaggaagacaaaggagtatgttttcatt
tacattggtgctgggctttatgctgttgttgcatatttgattcagcattacttcttcagt
attatgggagagaatcttactacaagagtaagaagaatgatgcttgcagcaattctgagg
aatgaagtcggatggttcgatgaagaagagcataactcaagccttgttgcggcccggtta
gctaccgatgcagctgatgtaaaatctgcaatagcggagagaatttctgttatactacaa
aacatgacctctctcctcacttcgttcatagttgctttcatagtggaatggagggtatcc
cttctcattttagctaccttccctcttcttgtccttgctaactttgcccagcaactctca
ctcaaagggtttgctggagacactgccaaggcccatgccaagactagcatgattgctggt
gagggagtgagcaatatccgaacggttgcagcttttaatgcccaagataaaatcctgtcc
ttgttctgccatgaactcagtgttccacaacttcgtagcctacgtcgaagccagacatct
ggcctcctttttggcctctctcagcttgctctttatgcctctgaagcgctcatcctttgg
tatggtgctcatcttgttagcaaaggggtctccacattctcaaaggttattaaggttttc
gtagtccttgtcatcacagctaattcagttgcagaaactgttagtcttgcgccagagatt
ataaggggcggtgaagctgtaggttcagtattttcaattttggaccgttccactaggatt
gatccagatgatcctgaggctgagcctgttgagtcaattcgcggggaaattgaacttaga
catgttgatttttcatacccctcaagacctgatgttccagttttcaaagaccttaacctt
agaatccgagctggccaaagccaagcccttgttggagctagtgggtgtggaaagagttct
gtgattgctttgattgagcgattttatgatccaactgctggaaaggttatgattgatggg
aaggacattcggcgattaaatttgaagtccttgaggcttaaagttggattggtgcaacaa
gagccagcactctttgcagcaagcatttttgacaacatagcctatggaaaggagggtgca
actgaagctgaagtaattgaagcagcacgcgcagccaatgtgcatggattcgttagcgca
ttgcctgatggatacaaaacaccagtaggcgagagaggagttcagctctcaggaggacaa
aaacaaagaattgcaatagcaagggcagttcttaaagacccagcaatccttttactagat
gaagctacaagtgcacttgatgctgaatcagaatgtgtgctgcaagaagcacttgaaagg
ttaatgagaggtcgaaccacagtgcttgtagctcacaggttatcaacgattagaggggtt
gacagtattggagtcgtacaagacggacggatagttgagcaaggcagccatgccgaatta
gttagccgaggcgacggagcatattctagactgttacagctacaacaccatcacatatga
DBGET
integrated database retrieval system