Ricinus communis (castor bean): 8276064
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Entry
8276064 CDS
T01087
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8276064
Membrane trafficking [BR:
rcu04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
8276064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Helo_like_N
DUF948
Neur_chan_memb
Cauli_AT
MCPsignal
DUF5089
Occludin_ELL
JHD
Vps53_N
SteA-like_C
Laminin_II
Syntaxin_2
Zw10_N
YkyA
DUF3450
CdiA_C
TMPIT
Motif
Other DBs
NCBI-GeneID:
8276064
NCBI-ProteinID:
XP_002517509
UniProt:
B9RUR4
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All DBs
Position
5:complement(29231504..29239546)
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AA seq
272 aa
AA seq
DB search
MDPISAVSEELGQIDGQIADIFRALSNGFQKLEKIKDVNRQSRQLEELTGKMKDCKRLIK
DFDREVKDLENRNDPNTNRMLNEKKQSMIKELNSYVALKKQYAANLENNKRVDLFDGPGE
ELNEENVLLASSMTNQQLMDNGNQMMDETDQAIERGKKIVQETINVGTDTAAALKAQTEQ
MSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAMLFLIVAGVIAIIIVKLVNPNNK
DIRDIPGLAPPAQNRRLLWHPNKESSYNGAAL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatatcagcagtaagcgaagaactaggtcagatcgatggccagatagctgac
attttccgagctttatcaaatgggtttcagaagttggagaagattaaggatgttaatagg
cagagtcggcaattggaagagcttactgggaagatgaaggattgtaagaggcttatcaaa
gattttgacagagaagtgaaggatttggagaatagaaatgacccaaacacaaacagaatg
ctgaatgaaaaaaagcaatcaatgattaaagagctgaattcatatgttgctcttaaaaag
caatatgcagccaatttagaaaacaacaagagagttgatctttttgatgggcctggtgaa
gagttaaatgaagaaaatgtgttgctagcttcatctatgacaaaccagcagttaatggat
aatggaaatcagatgatggacgagacagatcaagcaattgagaggggtaaaaagattgtt
caagagaccatcaacgtaggaacagacactgcagcagctcttaaggctcagactgaacaa
atgagtagaattgttaatgagcttgactctatccatttttcaatcaagaaagcttctcaa
ctggtcaaggaaattggtaggcaggttgcaactgacaaatgcatcatggcgatgctgttc
cttattgtcgcaggggtcatagctatcattattgtgaagcttgtgaacccaaacaacaaa
gacattcgggatattccaggattagcccctccagctcagaatcgcagattactttggcat
cctaataaagaaagtagctataacggggctgccttgtga
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