KEGG   Ricinus communis (castor bean): 8276163
Entry
8276163           CDS       T01087                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8276163
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    8276163
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 DEAD zf-C3HC4_2 ResIII Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-RING_4 Baculo_IE-1
Other DBs
NCBI-GeneID: 8276163
NCBI-ProteinID: XP_015580945
LinkDB
Position
9:complement(4050335..4058367)
AA seq 1117 aa
MEIISKEDKIQSATDSISNNIDNGSPVKRAITSTGFRVSLEIKQEEESSALKPVKEEPDL
GFEDEAGMDLDSDEFLQGRANRVTPIEECKEKPQELEIFKVKQEPKEVKEDVDTFKQVLG
VSVTNSGNTDECKVKEVKEEATELEETNISKREKDVKSETNQPPHPHVFPKNIRDMTFQE
SCSYREGRPYKPDSVKVKEEPDLVVLVNEEEKSSQRSIFDKPKYVKKEVVAVEDTRTING
VKVEDGDFPQEKDWYLVGSTMLTALSTTKGRKLVDNEIVHFVFPNTNFRFNSQWIVRFST
KRSGEIGRLPMEWGKCVVPLVNSNKVKFLGRCIAAPPTLHIMQEIMLYVSFYIHSSIFTE
LDKSTWRLEAHSNVDSTIYPLLTLFKLLKIGPYQKAEFTPEELDSRKRSLNLQDEAGAML
PIVKRRMGCQQYLEQNKDEQAILESSLNKLVGAVDTYNLEEMEPPHTLMCSLRSYQKQAL
YWMSECEKGIDVEKAAKTLRPCWAAYRICDARASSIYLNIFSGEATTQFPTATQMARGGI
LADAMGLGKTVMTISLILARPGKGSIDSQESTNTKKAKGGTLIVCPMALLGQWKDELETH
SELGSISIFVHYGGFRTTDPRVISGHDVVLTTYGVLTAAYKSDLEHSIFHRVEWYRLVLD
EAHTIKSWKTMGAQAAFKLSSHCRWCLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWSKL
IQRPYENGDPRGMKLIKAILRPLMLRRTKETKDKEGRPILVLPPMDIQIIECEHSEAEHD
FYDALFRRSKVKFDQFVAQGKVLHNYASILELLLRLRQCCNHPFLVLSRADSKQYTDLNK
LARRFLETNADSAAREQTVPTRAYIEEVVEDIRKGENNECPICMEYADDPVLTPCAHRMC
RECLLSSWRTPTTGLCPICRTLLKKADLLTCPTENKFRVNVEENWKESSKVSKLLECLER
IRRSDCGEKSIIFSQWTSFLDLLEIPLRRRAIGFLRFDGKLVQKQRERTLKEFNETKEKM
VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKDTL
EERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3354 nt   +upstreamnt  +downstreamnt
atggagattatttccaaagaagataagatccaatcagcaaccgattcaatcagtaacaac
attgataatggtagtcctgtcaagcgtgctattaccagtacaggcttccgtgtttctttg
gaaatcaaacaggaggaagaatcttctgccttaaaaccggtgaaagaggaacctgacttg
gggtttgaggatgaagcaggtatggatttggattccgatgagtttctgcagggaagggct
aatagagttaccccaattgaggaatgtaaggagaagccgcaagaactagagatttttaaa
gtaaaacaggagcctaaagaagtaaaagaggacgttgatacatttaagcaagtacttggt
gtttcagtaaccaacagtgggaatacagatgaatgcaaagtaaaagaagtgaaggaagaa
gcaacagaattagaggagactaacataagcaaaagagaaaaagacgtgaaatcagagact
aatcaaccaccacatccacatgtatttccaaaaaatattagggacatgacatttcaagaa
tcttgctcatacagagaaggcagaccctataagccagatagcgttaaagtcaaagaagag
cctgatttagtagtgctagtaaatgaggaggagaagtccagtcaaagaagtatatttgac
aagcctaaatatgtgaagaaagaagtagtagctgttgaagatacaaggaccataaatggt
gttaaagtggaagatggtgattttccacaagagaaagactggtacttggttggttcaact
atgctcaccgccttgtccactacaaaaggcagaaaattagtcgacaatgagattgtccat
tttgtatttcccaataccaatttcagattcaactcccaatggattgttcgtttttctact
aaacgttctggagagattggtcggcttccaatggaatggggaaaatgtgttgttccactt
gttaattctaataaggtgaaatttcttggacggtgtatagctgcacctcctactcttcac
attatgcaagagataatgttgtacgtgagcttttacattcacagttcaatattcactgag
cttgataagtcaacatggcggctggaagctcattcaaatgtggattctacaatttatcct
ctccttactttgttcaaattgctgaaaattggaccctatcagaaggcggaattcacccct
gaggagcttgattcgcgaaagcgttcattgaatcttcaagatgaagctggtgcaatgtta
ccaatagtaaaaaggagaatgggttgccagcagtatctagaacaaaacaaagacgaacaa
gctattttggagtcatctctcaacaagcttgttggtgctgtagatacatacaacttggag
gagatggagcccccacacacactaatgtgcagtttaaggtcataccagaaacaagctttg
tactggatgtctgaatgtgaaaaagggatcgatgttgagaaagcagcaaaaactctgcgt
ccgtgttgggcagcctatcgtatatgtgatgcaagggcttcctcaatctatttgaacatc
ttctctggggaggcaaccacacaatttccaacagcaacacagatggccagaggaggaatt
cttgctgatgcaatgggccttgggaagacagtgatgacaatttctctgatacttgcaaga
cctggcaagggaagtattgatagccaagaaagcacaaacactaagaaagcaaagggtggc
actcttattgtgtgtcccatggctttgctaggacaatggaaggatgaacttgaaacccat
tcagagctgggaagtatctccatatttgttcactatggtggtttcagaacaactgatccc
agggttatctctggacatgatgtggtcttgacaacatatggtgtcctgacggcagcttat
aaatctgatttggagcacagcatttttcatagggtagagtggtataggttggtgttagat
gaagctcataccatcaaatcctggaaaacaatgggtgctcaagctgctttcaaattatcc
tcacactgccgctggtgtctcacagggacaccccttcagaataacttggaagacctctac
agccttctatgcttcttgcatgttgaaccttggtgcaactgggcctggtggagcaaattg
attcagaggccttatgagaatggtgatccaagagggatgaaattgatcaaggctattttg
aggccattaatgttgaggagaaccaaggaaaccaaggataaagaaggaaggcccatactt
gtgcttccaccaatggatatacaaatcattgagtgtgaacattcagaagctgaacatgat
ttctacgatgcccttttcagaaggtcgaaggttaagtttgatcagtttgtggcgcaaggg
aaggttcttcacaattatgcatctatccttgagctattgcttcggttgaggcagtgttgc
aatcacccctttcttgtcttgagtcgagctgattcaaaacagtatacggacttgaacaaa
cttgcaagaaggttcctggaaacaaatgctgattctgctgctcgagaacagacagtcccc
acccgagcatacattgaagaggttgttgaggacatccggaagggagaaaacaatgagtgc
cccatttgcatggagtatgcagatgaccctgtgctcacaccatgtgcacataggatgtgc
agggaatgtctcctttcaagctggcgaacacctactactgggctatgcccaatctgccga
actttgttgaagaaagctgacctccttacatgtccaacagagaacaaattcagagttaat
gttgaggagaattggaaggagtcttcaaaggtttcaaaactcctggaatgcttggaaaga
atccgcaggtcagattgtggcgaaaagagcattattttcagccagtggacgtcatttttg
gacctcttagagattccattgagaaggagagcaattgggttcttaaggtttgatggaaaa
ctagtgcaaaagcaaagggagaggaccttgaaggagttcaatgaaaccaaagaaaaaatg
gtattgttgatgtccctgaaagctggtggcgttggcctgaatctaactgcagcctccaat
gtcttcctaatggatccatggtggaatcctgcagtggaggaacaagcaataatgagaatc
catcgaataggacagaagcgaacagttactgttagaagattcattgttaaggacacgctg
gaggaacgaatgcagcaagttcaggcaaggaagcaacggatgatagccggtgcactcacg
gatgaagaagtccggtcagccaggattgaagaactcaaaatgctatttagataa

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