Ricinus communis (castor bean): 8276203
Help
Entry
8276203 CDS
T01087
Name
(RefSeq) protein argonaute PNH1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8276203
03036 Chromosome and associated proteins [BR:
rcu03036
]
8276203
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8276203
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8276203
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8276203
microRNA pathway
RISC loading complex
8276203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
8276203
NCBI-ProteinID:
XP_002529351
UniProt:
B9STN2
LinkDB
All DBs
Position
3:complement(26634698..26645470)
Genome browser
AA seq
967 aa
AA seq
DB search
MLSPLPSSLSLSTLFIICHHLSYMPLMQMKDFEESYMVVSMQSLQTCKNLEIPFSNGDDN
SETAKESLGRKRANGRRSRGGKGLKVESKKILFQDYKLDSSEESSPSSCKSLMFHRRPGH
GQLGTKCIVKANHFLAQMPDSDLSHYSVEIKPEVTSRKLSKAIMTQLVKMHRETDLGTRL
PVYDGGRNLYTARSLPFTSKDFTITLVHEDEATGNIKKRDFEVTIKFEALAGMLQLRELL
SGKPVDTPQEAITVIDIVLRELAAQRYVSIGRSFYSPDIKKPQQLEGGLESWRGFYQSIR
PTQMGLSLNIDMSATAFIEPLLVIEFVAQILNKDVYSRPLSDADRVKVKKALRGVKVEVT
HRRNVRRKYRISGLTTQPTRELIFPLDEHMNMKSVVEYFQEMYDYTIQYPHLPCLQVGNQ
RKVNYLPMEACKIVRGQRYTKGLNEKQITSLLKVSCQRPRDQEMDILQTIHQNGYEHDPY
AKEFGISIDSKLASIDARVLPAPWLKYSDTGKVKEYLPQVGQWNMMNKKVINGSIVRYWA
CINFSRSVQETTARSFCQQLVQMCRISGMDFNGEPVIPIYAARPDQVKKALKYVYHAAAK
KLEGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVSLKI
NVKMGGRNTVLLDAICWRIPLVSDIPTIIFGADVTHPESGEDISPSIAAVVASQDWPEVT
KYAGLVCAQPHRQELIQDLFKTWQDPQQGTVAGGMIRELLLSFKKATGQKPLRIIFYRDG
VSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFASNHNDRSSIDRSG
NILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCY
TYARCTRSVSVVPPAYYAHLAAYRARFYMEPDASENPKICRTLTANGSCVRPLPALKEKV
KNVMFYC
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcccattgcctagctctctctctctctctactcttttcattatctgtcatcat
ctctcttatatgcctctcatgcaaatgaaggactttgaagaaagctatatggtggtatct
atgcaatctcttcaaacttgcaaaaatcttgagattccctttagtaatggagatgataac
tcggaaactgcaaaagaaagcttaggtaggaaaagagctaatggaaggagatcaagagga
ggcaaaggactcaaagttgagtccaagaaaatattatttcaagattataagcttgattca
agtgaagagtcttctccttcttcatgcaagagccttatgtttcatcgtaggcctggacat
ggacaattgggtaccaagtgcatagttaaagctaaccattttctagctcagatgcctgat
tcagacttgagccactatagtgttgaaataaaaccagaagtaacatctcgcaaattaagc
aaagccatcatgacacagttggttaaaatgcatagggaaactgatttaggaacgagactg
cctgtttatgatggaggcagaaacctttacacagcaagatcacttccttttacctcaaaa
gactttactataaccttggttcatgaagatgaggcaacaggcaatatcaagaagagagat
tttgaagtgacaataaaatttgaagcacttgctggtatgctgcaattacgtgagcttctt
tctggaaaaccagttgatacccctcaagaagcaattactgttattgacattgtactgaga
gaacttgcagctcaaagatatgtatcaattggaaggtcattctattctcctgatatcaag
aaaccgcagcagctcgaaggaggattagaatcatggagaggtttctaccaaagtataaga
ccgactcagatgggactgtcactaaatattgacatgtcagcaacggctttcattgaacct
ctccttgtcatcgaatttgttgctcaaattttgaataaagatgtgtattcgaggccattg
tcagacgcagatcgtgtcaaggtaaagaaagcactcaggggtgtaaaagttgaagtcact
cacagaagaaatgtacggagaaagtatagaatttcaggattgacgacacagcctacaaga
gagctaatcttcccgcttgatgagcatatgaacatgaaatcagttgttgagtactttcaa
gaaatgtatgactataccattcaatatccccatctaccttgcctgcaagttggaaaccag
aggaaggttaactatttgccgatggaggcttgcaagatagtcagggggcaaagatatacc
aaaggcctcaatgagaagcaaataacttctttgctaaaagtttcatgtcaaaggccgcgt
gatcaagaaatggacattttgcagacaattcaccaaaatggttatgaacatgatccctat
gcaaaggagttcggcatcagcatagacagcaagcttgcatcgattgatgctcgtgttttg
cctgctccgtggctgaagtacagcgatactggcaaagtgaaagaatatctgcctcaagtt
ggtcagtggaatatgatgaataagaaagtgataaatggaagcattgtaagatattgggct
tgcatcaacttctcacgaagcgttcaagaaaccactgctcgcagtttttgccaacagctg
gtccagatgtgccgaatttctggcatggattttaacggtgaacctgtaattccaatatat
gcagcaagacctgatcaggtaaagaaggccttgaaatatgtataccacgctgctgcaaag
aaacttgaaggaaaagaattagagttactcattgccattcttccagacaacaatggttca
ttgtatggtgatttaaaacgcatttgtgaaactgatctcgggttaatttctcaatgctgc
cttaccaagcatgtcttcaagattaacagacagtatttggcaaatgtgtcattaaaaatc
aatgttaagatgggaggaagaaatactgtgcttttagatgctatatgttggaggattccc
ttggttagtgacattccaaccataatttttggagctgatgtaacacatccagagtctgga
gaggacatcagtccgtctatagctgctgttgtagcctcccaagactggccagaagttaca
aaatatgctgggttggtttgcgctcagcctcatcggcaagagcttattcaagatttattc
aaaacctggcaagaccctcagcagggaacagttgctggtgggatgatcagggagctccta
ctttcattcaagaaggccaccgggcaaaagccattgaggatcatattttacagggatggt
gtcagtgaaggtcaattctatcaggttctactgtatgaactggatgcaattcgaaaggct
tgcgcatcacttgaacctagttaccaacctccggtaacatttgttgttgtccaaaagcgg
catcatactagacttttcgcaagcaatcacaatgatagaagtagcattgacaggagtgga
aatattttacctggtactgttgtggacactaaaatatgccatccgactgaatttgacttc
tatttatgtagtcatgcaggaattcaggggactagccgacctgcacattaccacgtgctg
tgggatgaaaacaacttcaccgccgatgagattcaatctctgacgaacaacctttgctat
acgtatgctaggtgtacgcggtcggtttctgtagttcctcctgcgtattatgctcatctg
gcagcttatcgagctcgattttacatggaacctgacgcatcagaaaatcctaaaatttgc
cgcacgctcacagctaatggatcgtgtgtccgcccgctgcctgcattgaaagagaaggtg
aagaatgtgatgttttattgctag
DBGET
integrated database retrieval system
