Ricinus communis (castor bean): 8276484
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Entry
8276484 CDS
T01087
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8276484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8276484
Spliceosome [BR:
rcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
8276484
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
8276484
NCBI-ProteinID:
XP_048232829
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Position
7:26627161..26631522
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNDADIIEEEDADAGNMEEDVDGDMADIEALNYDDLDSVSKLQK
TQRFNDIMQKVEGALEKGSDESDHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LSEEVLQKTVDACDRALALDTAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTPPSLRIRACRLLAAK
STLAARIDSTRGDPSGNTGRTLREAIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcttggcagaccttgatgagttatctgataatgatgct
gatattattgaggaagaagatgctgatgctggaaacatggaggaagatgttgatggggac
atggcggatatcgaggcccttaattatgatgatttggatagtgtctcaaaattgcagaaa
acacagagattcaatgatataatgcagaaagtggaaggtgccctcgagaaaggttctgac
gagtcagatcatggtattgtattggaagatgatcccgaatatcaactaattgtggactgt
aatgcattatcagttgatatcgagaatgaaatcatcattatccacaattttatccgtgac
aaataccgtttaaagtttccggaacttgagtcacttgtgcatcatcctattgattatgct
cgtgtggtgaaaaagataggcaatgagatggatttgacccttgttgatttggaagggctt
ttaccatcagctattattatggtggtttcagtgacagcatcaacaacaagtggcaaacca
ctttctgaagaagtcctccaaaagacagttgatgcatgcgatcgagctcttgcgcttgat
actgcaaagaaaaaggtgcttgattttgtagagagtagaatgggatacattgcaccaaat
ctttctgctattgttgggagtgctgttgcagcaaagcttatggggacggctggtggtctg
tcagcattagccaagatgcctgcttgtaatgttcagcttcttggtgccaagaagaagaac
ttagcaggattttccactgcaacatctcaatttcgtgtaggttatatcgagcaaacggag
gtattccagtcaactccaccttctctgagaatacgtgcttgccgactattggctgcaaaa
tcaacacttgctgcacggatagattctactaggggagatccatcaggaaacactggaaga
acacttcgggaagcaatccataagaaaatagagaagtggcaagagcctcctcctgcaaag
cagcctaaaccacttccagttcctgattctgagcccaagaaaaagaggggtgggcggcgt
ttgaggaagatgaaggaaagatatgcagtgacagacatgaggaagcttgccaacaggatg
caatttggtgtgcctgaagagagctctttaggtgatggactgggagaaggttatggaatg
cttggtcaagctgggagtggcaagctgcgtgtatctatcggtcagagcaaactcgctgca
aaagttgctaagaaattcaaggagaagcaatatggaagcagtggtgctacatctggtctg
acgtcaagtctcgcatttacacctgttcagggtattgagctctcaaatccccaagctcat
gcgcaccaacttggtagcggaacccagagtacctacttttctgagactggaacgttttca
aagatcaagaggacctaa
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