Ricinus communis (castor bean): 8276580
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Entry
8276580 CDS
T01087
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00906
Carotenoid biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
8276580
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8276580
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
8276580
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
8276580
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
8276580
NCBI-ProteinID:
XP_015583179
UniProt:
B9T406
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All DBs
Position
5:5656630..5661593
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AA seq
428 aa
AA seq
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MTVALLWIANPTTEVSSSFGLLHSIRVLDSSKFGFIDRNLMFKGREKKDKKQKWKSSSVN
IDLRNHCTGSGSKLPLISSMVASSAGEMAISSEEKVYNVVVKQAALIKRQLRTSGDLDVK
PDIVLPGTLGLLSDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVD
GPNASHITPTALDRWEARLEDLFQGRPFDMLDAALADTVAKFPVDIQPFKDMIEGMRLDL
KKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQAATESVYNAALALGIANQLTNIL
RDVGEDARRGRVYLPQDELAQAGLSDDDIFAGRVTDKWRNFMKNQIKRARMFFNEAEKGV
TELSAESRWPVWASLLLYRQILDEIEANDYNNFTRRAYVGKAKKLAFLPMAYARSAVGPA
RLPSLTKA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagcattactatggattgccaaccccactacagaggtttccagttcttttggg
ttgctccattcaatcagggttttagattcatcaaaatttggttttatcgatcgaaatttg
atgtttaagggaagagaaaagaaggataagaagcagaaatggaaatcaagttctgtgaat
attgatttgaggaatcattgcacaggtagtggaagcaaattgcctctgatatctagcatg
gtagctagctcagctggagaaatggctatttcttctgaggagaaggtatataatgtggtg
gtgaagcaagcagctttgattaaaaggcaattgaggactagcggtgatcttgatgtgaaa
ccagatattgttcttcctggaactctgggattgttgagtgatgcttatgacagatgtgga
gaagtttgtgctgagtatgcgaaaacattttatttgggaactttgctaatgacaccggaa
aggcgaagagctatctgggcaatatatgtgtggtgtaggaggacggatgagcttgtcgat
gggcctaatgcttcgcacataactccaacagctttagataggtgggaggcacggttagaa
gatcttttccaaggtcgtccatttgatatgctggatgctgctttggcagatactgttgcc
aaatttcctgttgacattcagccattcaaagatatgatagaaggaatgaggttggacctg
aagaaatcaagatataagaactttgatgagctttatctttactgttattatgttgctggg
actgttggactaatgagtgttccagtcatggggattgcacctgaatcacaagcagcaact
gagagtgtttacaatgctgccttggcattagggatagcaaaccagctcaccaacatactt
agggatgttggagaggatgcaagaagaggaagggtgtatttaccacaggatgagctagcg
caggcagggctttcagacgatgacatatttgctggaagagtgacagataaatggagaaat
ttcatgaaaaatcaaataaagagagcacggatgttcttcaatgaggcggagaaaggagtg
actgaactgagtgctgaaagtagatggccggtctgggcgtccttactgctataccggcaa
atactagacgagatcgaagcaaatgactataacaacttcacaaggagagcttatgtaggc
aaagccaagaagctagctttcttgccaatggcatatgcaagatcagctgttgggcccgca
agactgccttctttgacaaaggcatag
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