Ricinus communis (castor bean): 8276640
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Entry
8276640 CDS
T01087
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8276640
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8276640
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
Helicases
8276640
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
T4SS-DNA_transf
P-loop_SecA
AAA_19
ParD_antitoxin
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
8276640
NCBI-ProteinID:
XP_002520902
UniProt:
B9S4I3
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Position
6:complement(20849810..20854843)
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AA seq
535 aa
AA seq
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MEKGTSFLFAGITFNKKKFATDFSRFKEKKKCNDNAQTDDLRLLEAGKSEPDQVHVSVKK
RKRKNVASSEKVEGFNVFKSSKSVALPSNQQNDQDEIDQPFRKNKELNKQIESDALLRKH
FHIHVSGNNIPSPLQNFSELSSRYGCESYLLHNLVELGFKEPTPIQRQAIPVLLSGRECF
ACAPTGSGKTLAFVCPMLMKLKHSSKDGIRAVILCPTRELASQTTRECKKMAKGNKFRIK
LMTKELVRTKDLSRLPCDILVSTPLRLQLAIRKKKVDLSRVEYLVLDESDKLFELGLLKQ
IDSVFKACSNPSVIRSLFSATLPESVEELARTIMHDAVRVIVGRKNAASETIKQKLVFTG
SEEGKLIALRQSFAESLNPPVLIFVQNKERANELYEELKFDSIRVGVIHSDLLQTQREIA
VDDFRAGNSWVLIATDVVARGMDFKGVNCVINYDFPNSAAAYIHRIGRSGRAGRTGEAIT
FYTENDVPVLRNIANVMTVSGCEVPSWIMALRKVKWRRHCPQRDSISTKPKDQDD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggaacttcctttttgtttgctggcatcactttcaataagaagaagtttgcc
accgatttttcccgcttcaaggagaaaaaaaaatgtaatgataatgctcaaaccgatgat
ttgagattgctcgaagctggaaaatcagaaccagatcaagtgcacgtctctgttaagaag
aggaagcgaaaaaatgttgcgtcttcagaaaaggtggagggttttaatgtctttaagagt
tcaaagtctgtagctttaccaagtaatcaacagaatgatcaagatgaaatagatcagcct
ttcagaaagaataaggaattaaacaagcaaattgagagtgatgctcttctaaggaagcac
tttcatattcacgtgtctgggaataatatcccatccccacttcagaatttttcggagtta
agttcaagatatggatgtgagtcatatttattacacaatttggtagaacttggatttaag
gagccaactccaatccaaaggcaggctattccagtcctcctatctggccgagaatgtttt
gcttgtgctccaacgggttctgggaaaaccttggcttttgtgtgtccaatgcttatgaaa
cttaagcattcgtcaaaggatggtatcagagctgttatcttgtgtcctacacgagaatta
gcttctcagacgactagagagtgcaaaaaaatggctaaaggaaataaatttcgtattaag
ttaatgaccaaagaacttgtgagaactaaagatctttcgaggctaccatgtgatattctt
gtatcaacaccacttcggttacagttagccatccgcaagaaaaaggtggacttaagcagg
gttgagtatcttgttctggatgaatctgataagctatttgagcttggcttgttaaagcag
attgattctgtattcaaagcatgctccaatccttcagtaatacgttcattgttcagtgct
actttgcctgagtctgttgaggagcttgcacgcacaataatgcatgatgctgttagagta
attgttggcaggaagaatgctgcttctgaaacaattaagcaaaagctagtttttactgga
agtgaagaagggaaattaattgcacttcgtcaaagctttgcagagagtctgaacccacca
gtattgatttttgttcaaaacaaggaacgagcaaatgaattatacgaggaactgaaattt
gacagtattagagttggggttatccattctgatttgcttcaaactcagcgtgagattgct
gttgatgacttcagagctggaaattcatgggtcttgattgccactgatgttgttgcccgt
ggtatggattttaaaggtgtcaattgtgtgataaattacgacttcccaaattctgctgct
gcatatattcacaggattggtcgatctggcagagcagggaggactggagaagctattact
ttctatacagaaaatgatgttccagttttgcgaaatatagccaatgtaatgacagtttct
ggctgtgaggttccatcttggatcatggctttgcgtaaggtgaagtggaggaggcactgt
ccacaaagagattcaatttcaacaaaaccaaaagaccaggatgattaa
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