Ricinus communis (castor bean): 8276848
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Entry
8276848 CDS
T01087
Name
(RefSeq) autophagy-related protein 13a isoform X2
KO
K08331
autophagy-related protein 13
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8276848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8276848
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8276848
Membrane trafficking [BR:
rcu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
8276848
Atg1 complex
8276848
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
8276848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
DUF3627
Motif
Other DBs
NCBI-GeneID:
8276848
NCBI-ProteinID:
XP_002515663
UniProt:
B9RPJ4
LinkDB
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Position
1:complement(29783040..29791384)
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AA seq
621 aa
AA seq
DB search
MDLHSNSHPESGKLEQIVSQFLLKSLHIVLDSRIPSLHPHDRSADFQSSSRVRKSDKWFN
LVLGDRPATLGNLNFWQRNLMDPMIIDIILVRTGTASSSVENLYASPAERMPIETVIERW
VVQYKFLRAMAPQLGENSSSYKKTYKKSIILLRSLYSQTRLLPAYRIFRQLSSSSQTYDF
DIIYKVSSFCEPFIRSEEEKMKEYSFVPVEALPGHLSISVTFRPSLSDFNLEPLATFPPK
IITDYVGSPTTDPLRSFPSSEKGVRATSFPLRGICPPNSTACQRPHSWTSGFHRASPFML
NQPLVGSPPAYRTSPMPYDFPSPPLDTYGHRVQSYRPQTHQKATAYDDYQLSPPFSPSMS
PSTPTYFPNSNPVQTHITSETAPVTIPLPMTSRSSRYVSPNFSDPNKNSLPPLSPRSTRY
DPSSQESSFGIRSIKKAEITRAGESNSGVANHYSGHKTLKDSKDDSGRFSGLLSSSGSPR
IGFSRSSSRLSFQDELDDGDFSCPFDVDDVDISDSPISHNLDGKRNTESTPHSLLIGKKS
QDAAVGVLVHMLRTAPPLRQDPSCYSTHSFRTDLDEGVATASGFFLPRKTADALEELRSY
REMKDLLLSKSGTRMVNKEEA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcatagcaattctcatcccgaatctggaaaactggaacaaattgtttcccag
ttcctattgaagagtttgcacattgttttggactcccgaattccttctcttcatccacat
gatcgtagtgctgactttcagtccagttctcgggtgagaaagagtgacaaatggttcaat
ttagttctaggagatcgtccggctaccttaggtaacttgaatttctggcaaaggaatcta
atggaccccatgattattgacataatacttgttcgtactgggactgcttcatcatcagta
gaaaatctgtatgcttctccagctgagaggatgcctattgaaacagtcatagaaaggtgg
gttgttcagtataagttcctccgggctatggctccccagcttggggaaaattcttcctcg
tacaagaaaacatataagaagtctattatacttctacgttctctctattctcagacgagg
cttctcccagcttatcggatctttcggcagctaagctcatctagtcaaacttatgatttt
gatatcatttacaaagtttcttcattttgtgaaccattcattaggtcagaggaggaaaaa
atgaaagagtatagttttgtccctgtagaggcccttcctggccacctatctatatctgtg
acatttcgtccatctctatctgattttaaccttgagcctttggcaacattcccgccaaag
attataacagattatgttggtagtcctacaaccgaccctcttaggtcttttccttcttca
gagaaaggagttcgtgctacatccttcccattgaggggaatatgtccacctaattctaca
gcttgtcagaggccacatagctggacaagtggcttccacagagcttctccttttatgtta
aaccaacctcttgttggatctcctcctgcatatcgcacatctcctatgccatatgatttt
ccatctcctccactagatacctatggtcatagagttcaaagctacagaccgcagactcat
caaaaagctactgcttatgatgattatcagctttcacctccattctcaccttctatgtcc
ccttccaccccaacatactttcccaatagtaatcctgtgcaaactcatattacttcagaa
actgcccctgtaactatcccccttccgatgacaagtagaagttctagatatgtttctcca
aacttttctgacccaaataaaaattcacttccacctttatctcctagaagcacaaggtac
gatccctcatcccaggagtcttcatttggaatccggtcaatcaagaaagcagaaattaca
agggctggagagtcaaactctggcgtagcaaatcattattctggtcataagactctcaaa
gatagcaaagatgattcagggcgcttctcaggattgttatcttccagcggctcaccacga
attggattttctagaagttccagtagattatctttccaggatgaattagatgatggtgac
ttctcatgtccttttgatgttgatgatgttgatatatcagattcacctatcagccacaac
cttgatgggaaaaggaatacagaatctactcctcactcgttgctaatcggcaaaaaatcg
caagatgctgctgttggtgttcttgtgcacatgctgaggacagcacctcctctgcgtcaa
gatccaagttgttactcgactcattcttttaggactgatctagatgaaggggttgccacc
gcctctggattctttttgcctcggaagacggcagatgcactagaagagctcaggagttac
agagaaatgaaagacctgctactgtctaagagcggaactcggatggtcaataaagaagaa
gcttaa
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