Ricinus communis (castor bean): 8276907
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Entry
8276907 CDS
T01087
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8276907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8276907
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8276907
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
8276907
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
8276907
BRCA1-C complex
8276907
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
8276907
NCBI-ProteinID:
XP_048230211
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Position
5:complement(6406568..6417632)
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AA seq
535 aa
AA seq
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MVWALFPADPLSGEDKYYIFKKGTYKVGRKGCDVIINKDKGVSRIHAEIIVDEMISLNPM
KSNSDRTSRVRIRDCSKYGTFINKNLDSKEKVHEFPNKETTLKDGDMVSFGTGNATYSFS
FVPLIFFVCCSGSFQVNDPLQDKVSSIGACITFQLSEECTHVIMDHQMPLKKDVIEAIVA
KKPMVLQSWVELVAEKGIGSEIPSWSSYVPTLTVEGVPVKVVDSVTRANCLKGYTFLLES
LNMYKFGDRLQAMLEVGGANIVFIEEFYSSNEGLDYKENFRMVCVIPQGSADKFGRFSKL
SSLSRVNEVDLLYAVVSGHLDLSKLILPTVVVSSSCSTDETVVADSDEEVETMSTHATAN
ICSEAPKFVNKVETSPIQAKVETSPVDNPCTKLEDRHVVRSMGNNIGMTAKREKVDEPES
ANSDIIYSQNLIIRDWQLPVRISSTNERFIDFKRFKKKQTQSGNSFNNLIPFSKYSYKDS
DPGNQEMLHSMKEERKRKQMEAIAEDLFNSEKGRRRGGAGSICSLLSHRLLILGS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggctttgtttcccgccgatcctctctcaggtgaagataaatattacatcttt
aagaagggaacttataaagttggtcgtaaaggttgtgatgtaattattaataaagacaaa
ggagtttctcgaattcatgcagagataattgttgatgaaatgatatcattgaatcccatg
aagagcaactctgaccgaacctcaagagttcggattagagattgttccaagtatgggaca
ttcatcaacaagaatcttgattcaaaggaaaaggttcatgaattcccaaacaaagaaaca
actttaaaagatggggatatggtttcttttggaaccggtaatgcaacatacagtttttct
ttcgttccgctcattttttttgtctgctgctctggatcctttcaagtgaatgatcccctt
caagacaaagtttcatcaattggcgcttgtatcactttccaactaagcgaagagtgcact
catgtaatcatggatcatcaaatgccactgaagaaagatgtcattgaagctattgtggct
aagaaacctatggttctccaaagttgggttgagttggttgcagaaaaaggcattgggtca
gaaattcccagctggagttcctatgttccaacattaacagttgaaggagtaccagtcaaa
gttgtggactctgtaactcgtgcaaactgtttgaaaggatacacttttctgctggagtca
ttaaatatgtataagttcggggacaggttacaggcaatgttggaagtgggaggtgcaaat
attgtcttcattgaagaattttattccagtaatgaaggcttagattataaagaaaatttt
cgaatggtgtgtgttatccctcaaggatcagctgacaagtttggtcgtttcagcaaactg
agttcattatccagagtgaatgaagtggatctgttatatgctgttgtatctggacattta
gatttatctaagctgattttaccaactgtggttgtctcatcatcatgctccacggatgag
acagtagtagcagattctgatgaagaagtggaaacaatgtcaactcatgccactgcaaat
atttgcagtgaagcccctaaatttgtgaacaaagtggaaacatcccctatccaagcgaaa
gtggaaacatccccagttgacaacccttgtacaaaattggaggatcggcatgttgtgaga
tctatgggcaataatattggaatgaccgcaaaaagagagaaggtggatgagcctgaaagt
gcaaattctgatattatttacagccaaaatttaattattagagattggcaattacctgtc
agaatcagttctacaaatgaaagattcatagattttaagcgcttcaaaaagaaacaaact
caatcagggaatagcttcaacaacctaattccattctcaaaatattcatacaaagattcc
gaccctggcaatcaggaaatgctacactccatgaaagaagagagaaagcgaaaacagatg
gaagctatcgcagaggacttattcaacagtgaaaagggaagacggcgcggtggagctggt
tctatttgttcacttctttctcatagattgttaatccttggtagctga
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