Ricinus communis (castor bean): 8276918
Help
Entry
8276918 CDS
T01087
Name
(RefSeq) heat stress transcription factor A-4a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8276918
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
8276918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF4164
Vasculin
DUF7491
Motif
Other DBs
NCBI-GeneID:
8276918
NCBI-ProteinID:
XP_015578895
LinkDB
All DBs
Position
5:complement(6575206..6578074)
Genome browser
AA seq
434 aa
AA seq
DB search
MESSHGGSSSSNAPAPFLIKTYEMVDDPSTSSIVSWSHTGCSFVVWNPPEFAQDLLPKYF
KHNNFSSFVRQLNTYGFRKIDPDQWEFGNEEFIRGQRHLLSNIRRRKPIHSHSLQNQGNT
SPLTDLEKREYEEKIKRLKHDKSLLQMEVQRNEMEKQAFECQIMSLGERLVSMERRQMQL
VSCLAQLAKKPGFASALMQQSDYHNKKRRLLEFNHFSSECNTEDNPGWRLAKENPDRSPA
STLNFEIVDKLDSSIKCFENFLLGVKETSAQDMHDFRIVSPPSPVIFRQLSASSLDADTC
SPRSLPSSPHSMDIPSSPELAGCINPVDNLKTSPPSFSDHDADFKPACAPVDEAVQESAV
EATNPTAARPGVNDHFWEYFLTEAPGSTSIQELKKNQSKQADANNRTGDRHWWNTDGIHD
LTKHMEHLAPAERT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcacatggtggtagtagttcttctaatgcaccagccccctttctaatcaaa
acatatgagatggtagatgatccatcgaccagctctatagtttcttggagtcatactgga
tgcagttttgttgtgtggaatccacctgaatttgctcaagatttgctcccaaaatacttc
aagcacaataatttctccagttttgttaggcagcttaatacttatggattcaggaagatt
gatcctgatcaatgggagtttggtaatgaggaatttataagagggcagagacatcttcta
agtaacatccgtcgacgcaagccaattcatagccactctttgcagaatcaaggcaataca
tctccactgactgacttggaaaaaagggaatatgaggagaaaattaagcgactaaaacat
gataaaagcttgcttcagatggaggtacaaagaaatgaaatggagaagcaagcctttgag
tgtcaaattatgtcattaggtgagaggttggtgagcatggaacgcagacagatgcaattg
gtttcctgcttagctcaacttgcaaagaagccaggatttgcctcagctctcatgcagcaa
tcagattatcataacaaaaagagaagactactggaatttaatcacttcagtagcgagtgc
aacacggaagataacccaggttggagattggcgaaagaaaatcctgacaggtcccctgct
tcaacattgaactttgagatagttgataagttggattcatccataaaatgttttgagaat
tttcttttgggggtaaaagaaacttctgctcaggatatgcatgattttcgcatagtatca
ccgccttctcctgtcatttttcggcagttaagtgcatcatcactagatgcagatacttgt
tccccaagatcccttccttcctcaccccattctatggacattccctcatctccagagcta
gctggatgtatcaatcctgtcgacaacttgaagacttcaccaccaagtttctccgaccac
gatgcagatttcaagcctgcttgtgctcctgtggatgaagctgtgcaagaatcagcagta
gaggccacaaatcctaccgccgcgcggcctggagtgaatgatcatttctgggaatatttc
ctgactgaggcccctggttctactagcatacaagaactcaaaaaaaatcagtcaaagcaa
gcagacgctaacaatagaacaggtgatagacattggtggaacacggacggcatacatgat
cttacaaaacatatggagcatcttgcaccagctgaaagaacttga
DBGET
integrated database retrieval system
